Return to main results Retrieve Phyre Job Id

Job DescriptionP0AAU2
Confidence1.88%DateThu Jan 5 11:13:50 GMT 2012
Rank39Aligned Residues8
% Identity50%Templatec2jobA_
PDB info PDB header:lipid binding proteinChain: A: PDB Molecule:antilipopolysaccharide factor; PDBTitle: solution structure of an antilipopolysaccharide factor from2 shrimp and its possible lipid a binding site
ResolutionUNK

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   60.......
Predicted Secondary structure 



Query SS confidence 







Query Sequence  AEKATGDF
Query Conservation   



 

Alig confidence 







Template Conservation 
  
  

Template Sequence  AGKTAKDF
Template Known Secondary structure 
Template Predicted Secondary structure 
Template SS confidence 







   74.....80.
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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