Job Description P0AFP6 Confidence 41.65% Date Thu Jan 5 11:26:55 GMT 2012 Rank 46 Aligned Residues 157 % Identity 17% Template d1km4a_ SCOP info TIM beta/alpha-barrel Ribulose-phoshate binding barrel Decarboxylase Resolution 1.50

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		35	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50				.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.																					.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90
Predicted Secondary structure											.								.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence											.								.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	Q	K	I	V	T	G	V	T	.	A	S	Q	A	L	L	D	.	.	.	E	A	V	R	L	G	A	D	A	V	I	V	H	H	G	Y	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	W	K	G	E	S	P	V	I	R	G	M	K	R	N	R	L	K	T	L	L	A	N	D
Query Conservation											.								.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence											.								.	.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	N	R	L	I	L	A	M	D	L	M	N	R	D	D	A	L	R	V	T	G	E	V	R	E	Y	I	D	T	V	K	I	G	Y	P	L	V	L	S	E	G	M	D	I	I	A	E	F	R	K	R	F	G	C	R	I	I	A	D	F	A	V	A	D	I	P	E	T	N	E	K	I	C	R	A	T	F	K	A	G
Template Known Secondary structure		G	G	G								S	S												T	T	T		S														T																						S															T	T
Template Predicted Secondary structure
Template SS confidence
		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																																																																															.	.	.
Query SS confidence																																																																															.	.	.
Query Sequence		I	N	L	Y	G	W	H	L	P	L	D	A	H	P	E	L	G	N	N	A	Q	L	A	A	L	L	G	I	T	V	M	G	E	I	E	P	L	V	P	W	G	E	L	T	M	P	V	P	G	L	E	L	A	S	W	I	E	A	R	L	G	R	K	P	L	W	C	G	D	T	G	P	E	V	V	Q	R	.	.	.
Query Conservation																																																																															.	.	.
Alig confidence															.																.																																																.	.	.
Template Conservation															.																.
Template Sequence		A	D	A	I	I	V	H	G	F	P	G	A	D	.	S	V	R	A	C	L	N	V	A	E	E	M	G	R	E	.	V	F	L	L	T	E	M	S	H	P	G	A	E	M	F	I	Q	G	A	A	D	E	I	A	R	M	G	V	D	L	G	V	K	N	Y	V	G	P	S	T	R	P	E	R	L	S	R	L	R	E
Template Known Secondary structure			S						S	T	T				.													T			.						S		S	S	G	G	G	G	T	T																T								T	T
Template Predicted Secondary structure															.																.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.		.	.	.	.	.	110	.	.	.	.	.	.	.	.	.		120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
								168	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure		.	.	.	.	.	.										.
Query SS confidence		.	.	.	.	.	.										.
Query Sequence		.	.	.	.	.	.	V	A	W	C	T	G	G	G	Q	.	S	F	I	D	S	A	A	R	F	G	V	D	A	F	I	T	G
Query Conservation		.	.	.	.	.	.										.
Alig confidence		.	.	.	.	.	.										.
Template Conservation
Template Sequence		I	I	G	Q	D	S	F	L	I	S	P	G	V	G	A	Q	G	G	D	P	G	E	T	L	R	F	A	D	A	I	I	V	G
Template Known Secondary structure					S	S	S							B	S	T	T	S	B						T	T	T		S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions