Job Description P0AFP6 Confidence 28.40% Date Thu Jan 5 11:26:55 GMT 2012 Rank 91 Aligned Residues 122 % Identity 18% Template c3n2xB_ PDB info PDB header:lyase Chain: B: PDB Molecule:uncharacterized protein yage; PDBTitle: crystal structure of yage, a prophage protein belonging to the2 dihydrodipicolinic acid synthase family from e. coli k12 in complex3 with pyruvate Resolution 2.20 Å

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		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	L	D	E	A	V	R	L	G	A	D	A	V	I	V	H	H	G	Y	F	W	K	G	E	S	P	V	I	R	G	M	K	R	N	R	L	K	T	L	L	A	N	D	I	N	L	Y	G	W	H	L	P	L	D	A	H	P	E	L	G	N	N	A	Q	L	A	A	L	L	G	I	T	V	M	G	E	I	E	P
Query Conservation
Alig confidence																																										.	.	.																	.														.	.	.	.	.	.	.
Template Conservation																																										.	.	.																	.														.	.	.	.	.	.	.
Template Sequence		E	L	S	Q	H	A	Q	Q	A	G	A	D	G	I	V	V	I	N	P	Y	Y	W	K	V	S	E	A	N	L	I	R	Y	F	E	Q	V	A	D	S	V	.	.	.	T	L	P	V	M	L	Y	N	F	P	A	L	T	G	Q	D	.	L	T	P	A	L	V	K	T	L	A	D	S	R	.	.	.	.	.	.	.
Template Known Secondary structure											T		S								S	S	S																	T		.	.	.	S	S												S	S		.														.	.	.	.	.	.	.
Template Predicted Secondary structure																																										.	.	.																	.														.	.	.	.	.	.	.
Template SS confidence
		99	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.				.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	P	W	G	E	L	T	M	P	V	P	G	L	E	L	A	S	W	I	E	A	R	L	G	R	K	P	L	W	C	G	D	T	G	P	E	V	V	Q	R	V	A	W	C	T	G	G	G	Q	S	F	I	D	S	A	A	R	F	G	V	D	A	F	I	T	G
Query Conservation
Alig confidence		.																												.	.	.	.	.	.	.	.	.	.	.	.															.
Template Conservation		.																												.	.	.	.	.	.	.	.	.	.	.	.															.
Template Sequence		.	S	N	I	I	G	I	D	T	I	D	S	V	A	H	L	R	S	M	I	H	T	V	K	G	A	H	P	.	.	.	.	.	.	.	.	.	.	.	.	H	F	T	V	L	C	G	Y	D	D	H	L	F	N	.	T	L	L	L	G	G	D	G	A	I	S	A
Template Known Secondary structure		.	T	T								S																	T	.	.	.	.	.	.	.	.	.	.	.	.	T		B				S	S	G	G	G				.				T	T							G
Template Predicted Secondary structure		.																												.	.	.	.	.	.	.	.	.	.	.	.															.
Template SS confidence
			168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.													.	.	.	.	.	200	.	.	.	.	.	.	.	.		.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions