Job Description P0AFP6 Confidence 100.00% Date Thu Jan 5 11:26:55 GMT 2012 Rank 5 Aligned Residues 239 % Identity 37% Template c2yybA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ttha1606; PDBTitle: crystal structure of ttha1606 from thermus thermophilus hb8 Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.		.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																			.
Query SS confidence																			.
Query Sequence		M	K	N	T	E	L	E	Q	L	I	N	E	K	L	N	S	A	.	A	I	S	D	Y	A	P	N	G	L	Q	V	E	G	K	E	T	V	Q	K	I	V	T	G	V	T	A	S	Q	A	L	L	D	E	A	V	R	L	G	A	D	A	V	I	V	H	H	G	Y	F	W	K	G	E	S	P	V	I	R	G	M	K
Query Conservation																			.
Alig confidence																			.																																																										.
Template Conservation																																																																													.
Template Sequence		M	D	R	D	E	L	V	R	Y	L	D	A	Y	L	R	I	Q	D	F	P	Q	D	P	S	L	N	G	L	Q	V	E	G	K	R	T	V	R	K	V	G	A	A	V	D	A	G	E	A	I	F	R	K	A	L	E	E	E	V	D	F	L	I	V	H	H	G	L	F	W	G	K	P	F	P	I	.	V	G	H	H
Template Known Secondary structure			B												T	T	G	G	G		T	T		S	S										S	B											S										T	T		S								S		S	S					S	.
Template Predicted Secondary structure																																																																													.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.		.	.	.	.
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	N	R	L	K	T	L	L	A	N	D	I	N	L	Y	G	W	H	L	P	L	D	A	H	P	E	L	G	N	N	A	Q	L	A	A	L	L	G	I	T	V	M	G	E	I	E	P	L	V	P	W	G	E	L	T	M	P	V	P	G	L	E	L	A	S	W	I	E	A	R	L	G	R	K	P	L	W	C	G	D
Query Conservation
Alig confidence																																														.
Template Conservation																																														.
Template Sequence		K	R	R	L	E	T	L	F	Q	G	G	I	N	L	Y	A	A	H	L	P	L	D	A	H	E	E	V	G	N	N	F	V	L	A	R	E	L	G	L	V	D	L	T	P	.	W	D	V	G	V	K	G	R	F	P	Q	P	T	P	L	L	Q	V	A	D	R	L	G	Q	L	T	G	M	Q	P	L	V	H	Q	G
Template Known Secondary structure											T	T							S							T	T	T									T	T	T			S				.		S	T	T									S		B	S	T								T	T	S	S							S
Template Predicted Secondary structure																																														.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.		.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.
		160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	G	P	E	V	V	Q	R	V	A	W	C	T	G	G	G	Q	S	F	I	D	S	A	A	R	F	G	V	D	A	F	I	T	G	E	V	S	E	Q	T	I	H	S	A	R	E	Q	G	L	H	F	Y	A	A	G	H	H	A	T	E	R	G	G	I	R	A	L	S	E	W	L	N	E	N	T	D	L	D	V	T
Query Conservation
Alig confidence					.																				.	.	.
Template Conservation					.																				.	.	.
Template Sequence		G	L	D	.	H	V	E	T	V	I	L	V	S	G	S	G	T	G	L	L	P	K	V	.	.	.	D	A	D	L	F	V	T	G	E	P	K	H	S	V	F	H	E	T	F	E	R	G	L	N	V	I	Y	A	G	H	Y	D	T	E	T	F	G	V	K	A	L	A	A	H	L	E	A	R	F	G	L	P	W	V
Template Known Secondary structure		S		S	.	B									S	S		G	G	G	G	G	G		.	.	.		S	S					S				G	G	G							T	T												T	T
Template Predicted Secondary structure					.																				.	.	.
Template SS confidence
		159	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180				.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
		240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	I	D	I	P	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	L	D	H	P	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		235	.	.	.	.	240

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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