Job Description P0AFP6 Confidence 23.64% Date Thu Jan 5 11:26:55 GMT 2012 Rank 130 Aligned Residues 125 % Identity 15% Template c2r8wB_ PDB info PDB header:lyase Chain: B: PDB Molecule:agr_c_1641p; PDBTitle: the crystal structure of dihydrodipicolinate synthase (atu0899) from2 agrobacterium tumefaciens str. c58 Resolution 1.80 Å

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		45	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	Q	A	L	L	D	E	A	V	R	L	G	A	D	A	V	I	V	H	H	G	Y	F	W	K	G	E	S	P	V	I	R	G	M	K	R	N	R	L	K	T	L	L	A	N	D	I	N	L	Y	G	W	H	L	P	L	D	A	H	P	E	L	G	N	N	A	Q	L	A	A	L	L	G	I	T	V	M	G	E	I
Query Conservation
Alig confidence																																												.	.	.																	.
Template Conservation																																												.	.	.																	.
Template Sequence		A	V	A	L	A	K	D	A	E	A	A	G	A	D	A	L	L	L	A	P	V	S	Y	T	P	L	T	Q	E	E	A	Y	H	H	F	A	A	V	A	G	A	T	.	.	.	A	L	P	L	A	I	Y	N	N	P	T	T	T	R	F	T	.	F	S	D	E	L	L	V	R	L	A	Y	I	P	N	I	R	A	I
Template Known Secondary structure													T		S									S	S																			.	.	.	S	S								G	G	G	T				.											T	S	T	T
Template Predicted Secondary structure																																												.	.	.																	.
Template SS confidence
		118	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.				160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	L	V	P	W	G	E	L	T	M	P	V	P	G	L	E	L	A	S	W	I	E	A	R	L	G	R	K	P	L	W	C	G	D	T	G	P	E	V	V	Q	R	V	A	W	C	T	G	G	G	Q	S	F	I	D	S	A	A	R	F	G	V	D	A	F	I	T	G
Query Conservation
Alig confidence			.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.									.
Template Conservation			.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.									.
Template Sequence		K	.	.	.	.	.	.	.	.	X	P	L	P	A	D	A	D	Y	A	G	E	L	A	R	L	R	P	K	L	S	.	.	.	.	.	.	.	.	.	.	.	D	D	F	A	I	G	Y	S	.	G	D	W	G	C	T	D	A	T	L	A	G	G	D	T	W	Y	S	V
Template Known Secondary structure			.	.	.	.	.	.	.	.					T	T											T	T	T	S		.	.	.	.	.	.	.	.	.	.	.	T	T							.											T	T		S					S
Template Predicted Secondary structure			.	.	.	.	.	.	.	.																						.	.	.	.	.	.	.	.	.	.	.									.
Template SS confidence
		194									.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.												.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions