Job Description P0A840 Confidence 57.45% Date Thu Jan 5 11:06:48 GMT 2012 Rank 30 Aligned Residues 116 % Identity 16% Template c1s3mA_ PDB info PDB header:phosphodiesterase Chain: A: PDB Molecule:hypothetical protein mj0936; PDBTitle: structural and functional characterization of a novel2 archaeal phosphodiesterase Resolution 2.50 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.		.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.																																.	.
Predicted Secondary structure																													.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																													.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	R	I	L	L	S	N	D	D	G	V	H	A	P	G	I	Q	T	L	A	K	A	L	R	E	F	A	.	D	V	Q	V	V	A	P	D	R	N	R	S	G	A	S	N	S	L	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	E
Query Conservation																													.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																													.																				.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	K	I	G	I	M	S	D	T	H	D	H	L	P	N	I	R	K	A	I	E	I	F	N	D	E	N	V	E	T	V	I	H	C	G	D	F	V	S	L	F	V	I	K	E	F	E	N	L	N	A	N	I	I	A	T	Y	G	N	N	D	G	E	R	C	K	L	K	E	W	L	K	D	I	N	E	E	N	I	I
Template Known Secondary structure											T	T														T	S			S						S				S	T						G	G	G			S								T	T																T	T
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
		49	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100					.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure																																																						.	.	.	.
Query SS confidence																																																						.	.	.	.
Query Sequence		S	S	L	R	T	F	T	F	E	N	G	D	I	A	V	Q	M	G	T	P	T	D	C	V	Y	L	G	V	N	A	L	M	R	P	R	P	D	I	V	V	S	G	I	N	A	G	P	N	L	G	D	D	.	.	.	.	V	I	Y	S	G	T	V	A	A	A	M	E	G	R	H	L	G	F	P	A	L	A	V
Query Conservation																																																						.	.	.	.
Alig confidence																																	.	.	.																			.	.	.	.												.	.	.	.
Template Conservation																																	.	.	.																																		.	.	.	.
Template Sequence		D	D	F	I	S	V	E	I	D	D	L	K	F	F	I	T	H	G	H	H	Q	S	V	L	E	M	A	I	K	S	G	.	.	.	L	Y	D	V	V	I	Y	G	H	T	H	E	R	V	F	E	E	V	D	D	V	L	V	I	N	P	G	E	C	C	G	Y	L	.	.	.	.	T	G	I	P	T	I	G	I
Template Known Secondary structure			S							T	T								T	T													.	.	.			S						S	S									T	T									S	S		T	T	.	.	.	.	T	S
Template Predicted Secondary structure																																	.	.	.																																		.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.				.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.					.	.	.	.	.	150	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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