Job Description P0AGG0 Confidence 88.38% Date Thu Jan 5 11:29:00 GMT 2012 Rank 39 Aligned Residues 89 % Identity 15% Template c3qi7A_ PDB info PDB header:transcription Chain: A: PDB Molecule:putative transcriptional regulator; PDBTitle: crystal structure of a putative transcriptional regulator2 (yp_001089212.1) from clostridium difficile 630 at 1.86 a resolution Resolution 1.86 Å

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		13	.	.	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure															.	.	.
Query SS confidence															.	.	.
Query Sequence		F	D	R	V	R	S	S	R	L	D	V	E	L	.	.	.	G	I	G	D	D	C	A	L	L	N	I	P	E	K	Q	T	L	A	I	S	T	D	T	L	V	A	G	N	H	F	L	P	D	I	D	P	A	D	L	A	Y	K	A	L	A	V	N	L	S	D	L	A	A	M	G	A	D	P	A	W	L	T	L	A
Query Conservation															.	.	.
Alig confidence															.	.	.															.	.												.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.						.	.	.
Template Conservation																																.	.												.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.						.	.	.
Template Sequence		L	Q	K	V	K	E	K	R	P	E	I	I	T	I	S	A	P	X	G	D	D	K	N	Q	L	S	Q	F	V	D	.	.	V	N	L	G	V	S	A	E	E	R	G	.	.	.	.	.	.	.	.	.	K	V	L	A	E	R	S	K	.	.	.	.	.	.	.	.	E	X	G	A	K	.	.	.	A	F	I	H
Template Known Secondary structure										T	T	S					S	S			S									S	S	.	.												.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.		T	T		S	.	.	.
Template Predicted Secondary structure																																.	.												.	.	.	.	.	.	.	.	.									.	.	.	.	.	.	.	.						.	.	.
Template SS confidence
		128	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.			.	.	160	.	.	.	.	.	.	.	.										.	170	.	.	.	.	.	.									.	.	.	180	.				.	.	.	.
		90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.
Predicted Secondary structure						.
Query SS confidence						.
Query Sequence		L	T	L	P	.	D	V	D	E	A	W	L	E	S	F	S	D	S	L	F	D	L	L	N	Y	Y	D	M	Q	L	I	G	G	D	T
Query Conservation						.
Alig confidence						.
Template Conservation
Template Sequence		Y	A	S	T	D	D	L	K	D	V	N	I	A	K	R	L	E	X	I	K	E	T	C	K	N	I	G	L	P	F	V	Q	V	N	T
Template Known Secondary structure					T	T	G	G	G	S																	T	T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions