Job Description P0AGG0 Confidence 100.00% Date Thu Jan 5 11:29:00 GMT 2012 Rank 20 Aligned Residues 272 % Identity 15% Template c3mdoB_ PDB info PDB header:ligase Chain: B: PDB Molecule:putative phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of a putative phosphoribosylformylglycinamidine2 cyclo-ligase (bdi_2101) from parabacteroides distasonis atcc 8503 at3 1.91 a resolution Resolution 1.91 Å

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		38	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.								.	.	60	.	.	.		.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.		.	.	.	.	.	.	.	.	90	.	.	.	.	.	.							.	.	.	100	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.							.																			.																.	.	.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.							.																			.																.	.	.	.	.	.
Query Sequence		E	K	Q	T	L	A	I	S	T	D	T	L	V	A	G	N	H	F	L	P	.	.	.	.	.	.	.	D	I	D	P	A	D	.	L	A	Y	K	A	L	A	V	N	L	S	D	L	A	A	M	G	A	.	D	P	A	W	L	T	L	A	L	T	L	P	D	V	D	.	.	.	.	.	.	E	A	W	L	E	S
Query Conservation																						.	.	.	.	.	.	.							.																			.																.	.	.	.	.	.
Alig confidence																						.	.	.	.	.	.	.							.																			.																.	.	.	.	.	.
Template Conservation
Template Sequence		P	E	Y	C	N	I	X	H	A	D	G	A	G	T	K	S	S	L	A	Y	X	Y	W	K	E	T	G	D	L	S	V	W	K	G	I	A	Q	D	A	L	I	X	N	I	D	D	L	L	C	V	G	A	V	D	N	I	L	V	S	S	T	I	G	R	N	K	L	L	V	P	G	E	V	I	S	A	I	I	N	G
Template Known Secondary structure		T	T											T	T															T	T																			T	T	T			S	S											T	T	T	S
Template Predicted Secondary structure
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
		103	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.						.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.												.
Predicted Secondary structure												.																	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Query SS confidence												.																	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Query Sequence		F	S	D	S	L	F	D	L	L	N	.	Y	Y	D	M	Q	L	I	G	G	D	T	T	R	G	P	L	.	.	.	.	.	S	M	T	L	G	I	H	G	F	V	P	M	G	R	A	L	T	R	S	G	A	K	P	G	D	W	I	Y	V	T	G	T	P	G	D	S	.	.	.	.	.	.	.	.	.	.	.	A
Query Conservation												.																	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Alig confidence												.																	.	.	.	.	.																																					.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		T	D	E	L	L	A	E	L	R	E	X	G	V	G	C	Y	A	T	G	G	E	T	A	D	V	G	D	L	V	R	T	I	I	V	D	S	T	V	T	C	R	X	K	R	S	D	V	I	D	N	K	N	I	Q	G	G	D	V	I	V	G	L	A	S	S	G	Q	A	T	Y	E	K	E	Y	N	G	G	X	G	S
Template Known Secondary structure												T	T														T	T	T		S	S													G	G	G				G	G	G			T	T								S	S	B			T	T		S	S		B					S
Template Predicted Secondary structure
Template SS confidence
		126	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.																																		.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.	210	.
Predicted Secondary structure														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Query SS confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Query Sequence		A	G	L	A	I	L	Q	N	R	L	Q	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	D	A	K	D	A	D	Y	L	I	K	R	H	L	R	P	S	P	R	I	L	Q	G	Q	A	L	.	R	D	L	A	N	S	A	I
Query Conservation														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Alig confidence														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																											.
Template Conservation
Template Sequence		N	G	L	T	S	A	R	H	D	V	F	S	K	Y	L	A	K	K	Y	P	E	S	Y	D	A	A	V	P	K	E	L	V	Y	S	G	G	L	K	L	T	D	K	I	E	E	L	G	I	D	A	G	K	X	V	L	S	P	T	R	T	Y	A	P	V	I	K	V	L	L	D	K	L	R	S	Q	I	H	G	X	V
Template Known Secondary structure		S	S							T	T	B		T							G	G	G	S		T	T	S		G	G	G	S	S		S	S	B		T	T				T	T	T	T								T																		G	G	G
Template Predicted Secondary structure
Template SS confidence
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.
		212	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																									.	.
Query SS confidence																																									.	.
Query Sequence		D	L	S	D	G	L	I	S	D	L	G	H	I	V	K	A	S	D	C	G	A	R	I	D	L	A	L	L	P	F	S	D	A	L	S	R	H	V	E	.	.	P	E	Q	A	L	R	W	A	L	S	G	G	E	D	Y	E	L	C	F	T	V	P	E	L	N	R	G	A	L	D	V	A	L	G	H	L	G	V	P
Query Conservation																																									.	.
Alig confidence																		.	.	.																					.	.
Template Conservation																		.	.	.
Template Sequence		H	C	S	G	G	A	Q	T	K	V	X	H	F	V	E	N	.	.	.	K	R	V	T	K	D	N	L	F	P	I	P	P	L	F	R	T	I	Q	E	Q	S	G	T	D	W	S	E	X	Y	K	V	F	N	X	G	H	R	X	E	I	Y	I	A	P	E	H	A	E	E	V	I	G	I	S	K	S	F	G	I	D
Template Known Secondary structure					S	S	G	G	G	G	G	G	G	T		S	S	.	.	.							S																										S		T	T									G	G	G										T	T	T
Template Predicted Secondary structure																		.	.	.
Template SS confidence
		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.				.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	C	I	G	Q	M	T	A	D	I	E	G	L	C	F	I	R	D	G	E	P	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	Q	I	V	G	F	V	E	E	A	D	K	N	E	L	I	I	E	S	E	K	G	R
Template Known Secondary structure												S	S								T	T
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions