Job Description P0AGG0 Confidence 100.00% Date Thu Jan 5 11:29:00 GMT 2012 Rank 21 Aligned Residues 275 % Identity 13% Template c3kizA_ PDB info PDB header:ligase Chain: A: PDB Molecule:phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: crystal structure of putative phosphoribosylformylglycinamidine cyclo-2 ligase (yp_676759.1) from cytophaga hutchinsonii atcc 33406 at 1.50 a3 resolution Resolution 1.50 Å

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		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60									.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.
Query Sequence		P	E	K	Q	T	L	A	I	S	T	D	T	L	V	A	G	N	H	F	L	P	D	I	D	.	.	.	.	.	.	.	.	P	A	D	L	A	Y	K	A	L	A	V	N	L	S	D	L	A	A	M	G	A	D	P	A	W	L	T	L	A	L	T	L	P	D	V	D	E	A	W	L	E	S	F	S	D	S	L	F
Query Conservation																										.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.																														.
Template Conservation																																																															.
Template Sequence		D	P	E	Y	C	N	I	X	H	A	D	G	A	G	T	K	S	S	L	A	Y	V	Y	W	K	E	T	G	D	I	S	V	W	K	G	I	A	Q	D	A	V	I	X	N	I	D	D	L	I	C	V	G	A	V	D	N	I	L	L	S	S	.	T	I	G	R	N	K	N	L	I	P	G	E	V	L	A	A	I	I
Template Known Secondary structure			T	T											T	T															T																			G	G	G	T			S	S						.						T	T	T	S
Template Predicted Secondary structure																																																															.
Template SS confidence
		46	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.		.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.
		109	110	.	.	.										.	.	.	.	.	.	120	.	.	.	.	.	.	.						.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160												.	.	.
Predicted Secondary structure							.	.	.	.	.	.	.	.	.															.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Query SS confidence							.	.	.	.	.	.	.	.	.															.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Query Sequence		D	L	L	N	Y	.	.	.	.	.	.	.	.	.	Y	D	M	Q	L	I	G	G	D	T	T	R	G	P	.	.	.	.	.	L	S	M	T	L	G	I	H	G	F	V	P	M	G	R	A	L	T	R	S	G	A	K	P	G	D	W	I	Y	V	T	G	T	.	.	.	.	.	.	.	.	.	.	.	P	G	D
Query Conservation							.	.	.	.	.	.	.	.	.															.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.	.	.	.	.	.															.	.	.	.	.																																		.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	G	T	E	E	V	L	Q	X	L	R	D	N	G	I	G	I	Y	S	T	G	G	E	T	A	D	V	G	D	L	V	R	T	I	I	V	D	S	T	V	T	C	R	X	K	R	Q	D	V	I	S	N	E	N	I	K	A	G	N	V	I	V	G	F	A	S	Y	G	Q	T	S	Y	E	T	E	Y	N	G	G	X
Template Known Secondary structure														T	T														T	T	T		S	S													G	G	G				G	G	G			T	T								S	S	B			T	T		S	S		B
Template Predicted Secondary structure
Template SS confidence
		125	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.																																		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query SS confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Query Sequence		S	A	A	G	L	A	I	L	Q	N	R	L	Q	V	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	A	K	D	A	D	Y	L	I	K	R	H	L	R	P	S	P	R	I	L	Q	G	Q	A	L	.	R	D	L	A	N	S
Query Conservation																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Alig confidence																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.
Template Conservation
Template Sequence		G	S	N	G	L	T	S	A	R	H	D	V	F	N	N	V	L	A	S	K	Y	P	E	S	F	D	P	K	V	P	E	N	L	V	Y	S	G	E	X	N	L	T	D	P	Y	L	N	V	P	L	D	A	G	K	L	V	L	S	P	T	R	T	Y	A	P	L	X	K	E	I	I	H	Q	Y	K	G	K	L	D	G
Template Known Secondary structure		T	T	S	S									B		T							G	G	G	S		T	T	S		G	G	G	S	S		S	S	B		T	T				T	T		S	S																								S	T	T			S
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		A	I	D	L	S	D	G	L	I	S	D	L	G	H	I	V	K	A	S	D	C	G	A	R	I	D	L	A	L	L	P	F	S	D	A	L	S	R	H	V	E	.	.	P	E	Q	A	L	R	W	A	L	S	G	G	E	D	Y	E	L	C	F	T	V	P	E	L	N	R	G	A	L	D	V	A	L	G	H	L	G
Query Conservation																																											.	.
Alig confidence																	.	.																									.	.
Template Conservation																	.	.
Template Sequence		V	V	H	C	S	G	G	G	Q	T	K	V	L	H	F	.	.	T	D	A	T	T	H	I	I	K	D	N	L	F	D	V	P	P	L	F	Q	L	I	Q	G	Q	S	N	T	P	W	E	E	X	Y	K	V	F	N	X	G	H	R	L	E	I	Y	T	D	A	A	H	A	E	G	X	I	A	I	A	K	K	F	N
Template Known Secondary structure							T	T	G	G	G	G	G	G	G	G	.	.			T	T							S																T										S		T	T																						T	T
Template Predicted Secondary structure																	.	.
Template SS confidence
		285	.	.	.	.	290	.	.	.	.	.	.	.	.	.			300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
		288	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure													.	.	.
Query SS confidence													.	.	.
Query Sequence		V	P	F	T	C	I	G	Q	M	T	A	.	.	.	D	I	E	G	L	C	F	I	R	D	G	E	P	V	T	L
Query Conservation													.	.	.
Alig confidence													.	.	.
Template Conservation
Template Sequence		I	E	A	K	I	I	G	R	V	E	A	P	V	A	G	K	R	L	T	I	T	G	P	Q	G	T	E	Y	T	Y
Template Known Secondary structure												S		B	T	T	B	S						T	T	S
Template Predicted Secondary structure
Template SS confidence
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions