Job Description P0AGG0 Confidence 100.00% Date Thu Jan 5 11:29:00 GMT 2012 Rank 8 Aligned Residues 291 % Identity 21% Template c2z1tA_ PDB info PDB header:lyase Chain: A: PDB Molecule:hydrogenase expression/formation protein hype; PDBTitle: crystal structure of hydrogenase maturation protein hype Resolution 2.60 Å

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		21	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.
Predicted Secondary structure																																																																											.
Query SS confidence																																																																											.
Query Sequence		L	D	V	E	L	G	I	G	D	D	C	A	L	L	N	I	P	E	K	Q	T	L	A	I	S	T	D	T	L	V	A	G	N	H	F	L	P	D	I	D	P	A	D	L	A	Y	K	A	L	A	V	N	L	S	D	L	A	A	M	G	A	D	P	A	W	L	T	L	A	L	T	L	P	.	D	V	D	E	A	W
Query Conservation																																																																											.
Alig confidence																					.	.																	.	.	.																																		.
Template Conservation																					.	.																	.	.	.
Template Sequence		D	N	P	I	L	G	T	L	N	D	A	A	R	L	D	L	T	G	P	.	.	L	A	M	S	T	D	S	Y	T	V	D	P	I	F	F	P	.	.	.	G	G	D	I	G	T	L	A	V	H	G	T	V	N	D	V	S	M	L	G	A	R	P	R	Y	L	S	C	G	F	I	L	E	E	G	L	D	M	D	I
Template Known Secondary structure				T	T	T	T	T			S	S							S	S	.	.											S	S	S			T	.	.	.	T																	T	T	T														T	T
Template Predicted Secondary structure																					.	.																	.	.	.
Template SS confidence
		30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.			.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.				.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.
Predicted Secondary structure																														.	.	.	.	.	.
Query SS confidence																														.	.	.	.	.	.
Query Sequence		L	E	S	F	S	D	S	L	F	D	L	L	N	Y	Y	D	M	Q	L	I	G	G	D	T	T	R	G	P	.	.	.	.	.	.	L	S	M	T	L	G	I	H	G	F	V	P	M	G	R	A	L	T	R	S	G	A	K	P	G	D	W	I	Y	V	T	G	T	P	G	D	S	A	A	G	L	A	I	L	Q	N
Query Conservation																														.	.	.	.	.	.
Alig confidence																														.	.	.	.	.	.
Template Conservation
Template Sequence		L	E	R	V	V	A	S	M	G	K	A	A	R	E	A	G	V	F	I	V	T	G	D	T	K	V	V	P	R	G	A	C	D	K	M	F	I	N	T	T	G	I	G	E	I	L	V	D	P	A	P	S	G	D	R	A	R	P	G	D	A	I	L	I	S	G	S	M	G	D	H	G	L	T	I	L	S	Q	R	Q
Template Known Secondary structure																	T													B	T	T	B	S	S														S	S				T	T				T	T						S	S		S	S										T	T
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
		174	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.
Predicted Secondary structure																																											.
Query SS confidence																																											.
Query Sequence		R	L	Q	V	A	D	A	K	D	A	D	Y	L	I	K	R	H	L	R	P	S	P	R	I	L	Q	G	Q	A	L	R	D	L	A	N	S	A	I	D	L	S	.	D	G	L	I	S	D	L	G	H	I	V	K	A	S	D	C	G	A	R	I	D	L	A	L	L	P	F	S	D	A	L	S	R	H	V	E	P	E
Query Conservation																																											.
Alig confidence													.	.	.	.	.																										.
Template Conservation													.	.	.	.	.
Template Sequence		G	L	N	F	A	A	D	V	C	S	D	.	.	.	.	.	S	A	S	L	N	R	V	V	E	K	L	V	L	E	V	G	D	I	H	V	L	R	D	P	T	R	G	G	L	A	T	T	L	N	E	I	A	G	Q	S	Q	A	V	C	H	V	L	E	T	A	V	P	V	R	E	S	V	R	N	G	C	S	F	L
Template Known Secondary structure		T					T	T					.	.	.	.	.															T											T	T														T	S						G	G	G	S													T
Template Predicted Secondary structure													.	.	.	.	.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.						.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		253	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.									.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure																																				.	.													.	.	.	.	.	.	.	.
Query SS confidence																																				.	.													.	.	.	.	.	.	.	.
Query Sequence		Q	A	L	R	W	A	L	S	G	G	E	D	Y	E	L	C	F	T	V	P	E	L	N	R	G	A	L	D	V	A	L	G	H	L	.	.	G	V	P	F	T	C	I	G	Q	M	T	A	.	.	.	.	.	.	.	.	D	I	E	G	L	C	F	I	R	D	G	E	P	V	T	L	D	W	K	G	Y	D	H	F
Query Conservation																																				.	.													.	.	.	.	.	.	.	.
Alig confidence						.	.																													.	.													.	.	.	.	.	.	.	.
Template Conservation						.	.
Template Sequence		G	L	D	P	.	.	L	Y	L	A	N	E	G	K	L	I	C	I	L	P	E	E	R	A	E	A	A	L	A	V	L	R	E	G	P	H	G	E	H	A	A	R	I	G	S	V	K	S	V	G	E	L	G	A	A	R	A	G	Q	V	V	M	E	T	A	L	G	G	H	R	L	L	S	M	L	E	G	E	Q	L
Template Known Secondary structure		T			T	.	.	T	T	S			S	S																				T	S	T	T	G	G	G										T	T	S	S	S	S			T	T							T	T	S	S								S	S	S
Template Predicted Secondary structure						.	.
Template SS confidence
		260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
		323
Predicted Secondary structure
Query SS confidence
Query Sequence		A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P
Template Known Secondary structure		T
Template Predicted Secondary structure
Template SS confidence
		338

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions