Job Description P0AGG0 Confidence 100.00% Date Thu Jan 5 11:29:00 GMT 2012 Rank 4 Aligned Residues 296 % Identity 27% Template c2yxzA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thiamin-monophosphate kinase; PDBTitle: crystal structure of tt0281 from thermus thermophilus hb8 Resolution 1.90 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	E	F	S	L	I	A	R	Y	F	D	R	V	R	S	S	R	L	D	V	E	L	G	I	G	D	D	C	A	L	L	N	I	P	E	K	Q	T	L	A	I	S	T	D	T	L	V	A	G	N	H	F	L	P	D	I	D	P	A	D	L	A	Y	K	A	L	A	V	N	L	S	D	L	A	A	M	G	A	D
Query Conservation
Alig confidence															.	.																				.
Template Conservation															.	.																				.
Template Sequence		L	G	E	R	A	L	L	A	R	L	A	P	L	.	.	G	Y	P	P	E	A	P	L	P	P	G	D	D	A	G	G	V	W	A	.	E	G	R	A	W	L	L	K	T	D	G	F	L	Y	R	E	V	A	L	K	G	M	G	P	F	E	V	G	F	R	G	V	A	A	T	A	S	D	L	L	A	K	M	G	R
Template Known Secondary structure												T	T	T	.	.	T			T	T		S	S		T	T	S	S	S						.	T	T																		T	T																					T	T
Template Predicted Secondary structure															.	.																				.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.			.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.		.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		83	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
Predicted Secondary structure													.																																																																				.
Query SS confidence													.																																																																				.
Query Sequence		P	A	W	L	T	L	A	L	T	L	P	.	D	V	D	E	A	W	L	E	S	F	S	D	S	L	F	D	L	L	N	Y	Y	D	M	Q	L	I	G	G	D	T	T	R	G	P	L	S	M	T	L	G	I	H	G	F	V	P	M	G	R	A	L	T	R	S	G	A	K	P	G	D	W	I	Y	V	T	G	T	.
Query Conservation													.																																																																				.
Alig confidence													.																																			.																			.														.
Template Conservation																																																.																			.
Template Sequence		P	L	G	F	T	L	G	L	F	L	P	E	D	L	E	E	G	F	V	L	E	L	V	R	G	A	A	E	A	A	K	R	L	G	A	F	L	L	G	G	D	T	N	R	G	V	.	E	V	A	L	T	V	S	G	Y	A	L	A	E	A	P	L	P	R	.	K	A	L	P	G	D	L	L	Y	L	A	G	D	R
Template Known Secondary structure													T	T																				T	T												S	.	S												S	S				S	.				T	T							S	S
Template Predicted Secondary structure																																																.																			.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.		.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.		.	.	.	150	.	.	.	.	.	.	.	.	.	160
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
Predicted Secondary structure
Query SS confidence
Query Sequence		P	G	D	S	A	A	G	L	A	I	L	Q	N	R	L	Q	V	A	D	A	K	D	A	D	Y	L	I	K	R	H	L	R	P	S	P	R	I	L	Q	G	Q	A	L	R	D	L	A	N	S	A	I	D	L	S	D	G	L	I	S	D	L	G	H	I	V	K	A	S	D	C	G	A	R	I	D	L	A	L	L	P
Query Conservation
Alig confidence																		.	.	.																			.																												.	.	.
Template Conservation																		.	.	.																			.																												.	.	.
Template Sequence		W	G	R	T	G	A	A	I	R	A	H	Y	E	G	R	S	.	.	.	L	E	G	F	P	K	I	R	E	A	A	F	Y	P	L	P	R	L	.	E	L	L	A	L	S	G	L	L	R	G	S	L	D	S	S	D	G	L	A	E	T	L	W	Q	L	A	.	.	.	D	L	G	V	G	V	E	V	E	A	L	P
Template Known Secondary structure		T	T												T			.	.	.		T	T															G	.	G	G	G	G	G	T	T	T		S						S	S											.	.	.	T	T	T
Template Predicted Secondary structure																		.	.	.																			.																												.	.	.
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.				.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.		.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.				.	.	.	.	.	.	.	.	230	.	.	.
		241	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		F	S	D	A	L	S	R	H	V	E	.	P	E	Q	A	L	R	W	A	L	S	G	G	E	D	Y	E	L	C	F	T	V	P	E	L	N	R	G	A	L	D	V	A	L	G	H	L	G	V	P	F	T	C	I	G	Q	M	T	A	D	I	E	G	L	C	F	I	R	D	G	E	P	V	T
Query Conservation												.
Alig confidence												.																																																							.	.	.
Template Conservation																																																																			.	.	.
Template Sequence		L	Y	P	D	V	L	A	F	A	G	S	E	E	A	A	L	E	L	V	L	Y	G	G	E	E	F	E	A	V	L	V	V	P	Q	E	G	A	A	A	V	E	A	R	A	K	A	K	G	L	P	L	F	R	A	G	R	V	V	A	G	E	G	V	Y	L	.	.	.	R	G	A	P	L	P
Template Known Secondary structure											S	S										S													S	T	T											T	T											S	S	S					.	.	.	T	T
Template Predicted Secondary structure																																																																			.	.	.
Template SS confidence
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.				.	300	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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