Return to main results Retrieve Phyre Job Id

Job DescriptionP0AGG0
Confidence100.00%DateThu Jan 5 11:29:00 GMT 2012
Rank16Aligned Residues267
% Identity15%Templatec2v9yA_
PDB info PDB header:ligaseChain: A: PDB Molecule:phosphoribosylformylglycinamidine cyclo-ligase; PDBTitle: human aminoimidazole ribonucleotide synthetase
Resolution2.10 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   38.40.........50.........60... ......70.........80.........90.........100.........110......
Predicted Secondary structure 
















.









Query SS confidence 

























.




















































Query Sequence  EKQTLAISTDTLVAGNHFLPDIDPAD. LAYKALAVNLSDLAAMGADPAWLTLALTLPDVDEAWLESFSDSLFDLLNYYDM
Query Conservation      

   
             
  . 
  

    


 
 

 
      
  
         
  

  
    

Alig confidence 

























.




















































Template Conservation      

   
    
            

  

  






 

 
   
  
         
  
  

  
    
 
Template Sequence  KDPLLASGTDGVGTKLKIAQLCNKHDTIGQDLVAMCVNDILAQGAEPLFFLDYFSCGKLDLSVTEAVVAGIAKACGKAGC
Template Known Secondary structure  SS

TTT

TTTTT
SS

T
Template Predicted Secondary structure 


















Template SS confidence 















































































   485....490.........500.........510.........520.........530.........540.........550.........560....
 
   117..120......... 130.........140. ........150.........160.........170... ......
Predicted Secondary structure 

.......


.


















.........





Query SS confidence 












. . . . . . .











.































. . . . . . . . .





Query Sequence  QLIGGDTTRGPLS. . . . . . . MTLGIHGFVPMG. RALTRSGAKPGDWIYVTGTPGDSAAGLAILQN. . . . . . . . . RLQVAD
Query Conservation   



 
      .......    
 
     .       
  

 
 
 
  
    
      .........      
Alig confidence 












.......











.































.........





Template Conservation   





             
  
 

             
  

 
 


  
    
                     
Template Sequence  ALLGGETAEMPDMYPPGEYDLAGFAVGAMERDQKLPHLERITEGDVVVGIASSGLHSNGFSLVRKIVAKSSLQYSSPAPD
Template Known Secondary structure 
TTTS
TT
GGG
S

GGG

TT

SSSTTSSSS

TTSB

T
Template Predicted Secondary structure 







































Template SS confidence 















































































   565....570.........580.........590.........600.........610.........620.........630.........640....
 
   180.........190.... .....200.........210.... .....220.........230.........240.........250 ...
Predicted Secondary structure 




...







.










..


Query SS confidence 














. . .



















.



































. .


Query Sequence  AKDADYLIKRHLRPS. . . PRILQGQALRDLANSAIDLS. DGLISDLGHIVKASDCGARIDLALLPFSDALSRHVE. . PEQ
Query Conservation                 ...            
 
  


.


   
 


  

 
  


  


         ..   
Alig confidence 














...



















.










.























..


Template Conservation             
            
     
 
  


 


   
 
  . 

 
  
    


              
Template Sequence  GCGDQTLGDLLLTPTRIYSHSLLPVLRSGHVKAFAHITGGGLLENIPRVL. PEKLGVDLDAQTWRIPRVFSWLQQEGHLS
Template Known Secondary structure  TS
SSBT





TT




TTSGGGS.
TTGGGS


T

Template Predicted Secondary structure 














.











Template SS confidence 















































































   645....650.........660.........670.........680.........690.... .....700.........710.........720...
 
   254.....260.........270.........280.........290.........300.....
Predicted Secondary structure 












Query SS confidence 



















































Query Sequence  ALRWALSGGEDYELCFTVPELNRGALDVALGHLGVPFTCIGQMTADIEGLCF
Query Conservation       
  
    

  
           
   

    

 

        
Alig confidence 



















































Template Conservation    
          

  
  
    
   
   
    


 

    
 
 
Template Sequence  EEEMARTFNCGVGAVLVVSKEQTEQILRGIQQHKEEAWVIGSVVARPRVKVK
Template Known Secondary structure 

TT
GGGTT




Template Predicted Secondary structure 










Template SS confidence 



















































   724.....730.........740.........750.........760.........770.....
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions