Job Description P0AGG0 Confidence 100.00% Date Thu Jan 5 11:29:00 GMT 2012 Rank 7 Aligned Residues 303 % Identity 22% Template c2rb9D_ PDB info PDB header:structural genomics, unknown function Chain: D: PDB Molecule:hype protein; PDBTitle: crystal structure of e.coli hype Resolution 2.00 Å

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		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.					.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure																																.	.	.	.
Query SS confidence																																.	.	.	.
Query Sequence		F	S	L	I	A	R	Y	F	D	R	V	R	S	S	R	L	D	V	E	L	G	I	G	D	D	C	A	L	L	N	.	.	.	.	I	P	E	K	Q	T	L	A	I	S	T	D	T	L	V	A	G	N	H	F	L	P	D	I	D	P	A	D	L	A	Y	K	A	L	A	V	N	L	S	D	L	A	A	M	G	A
Query Conservation																																.	.	.	.
Alig confidence														.	.	.																.	.	.	.																						.	.	.
Template Conservation														.	.	.																																									.	.	.
Template Sequence		Q	Q	L	I	N	S	L	F	M	E	A	F	.	.	.	A	N	P	W	L	A	E	Q	E	D	Q	A	R	L	D	L	A	Q	L	V	A	E	G	D	R	L	A	F	S	T	D	S	Y	V	I	D	P	L	F	F	.	.	.	P	G	G	N	I	G	K	L	A	I	C	G	T	A	N	D	V	A	V	S	G	A
Template Known Secondary structure														.	.	.							T			S	S													S												S	S	S			.	.	.	T	T																	T	T	T
Template Predicted Secondary structure														.	.	.																																									.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.				.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.				.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.							.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.
Predicted Secondary structure														.																																			.	.	.	.	.	.
Query SS confidence														.																																			.	.	.	.	.	.
Query Sequence		D	P	A	W	L	T	L	A	L	T	L	P	.	D	V	D	E	A	W	L	E	S	F	S	D	S	L	F	D	L	L	N	Y	Y	D	M	Q	L	I	G	G	D	T	T	R	G	P	.	.	.	.	.	.	L	S	M	T	L	G	I	H	G	F	V	P	M	G	R	A	L	T	R	S	G	A	K	P	G	D	W
Query Conservation														.																																			.	.	.	.	.	.
Alig confidence														.																																			.	.	.	.	.	.
Template Conservation
Template Sequence		I	P	R	Y	L	S	C	G	F	I	L	E	E	G	L	P	M	E	T	L	K	A	V	V	T	S	M	A	E	T	A	R	T	A	G	I	A	I	V	T	G	D	T	K	V	V	Q	R	G	A	A	D	K	L	F	I	N	T	A	G	M	G	A	I	P	T	N	I	H	W	G	A	Q	T	L	T	A	G	D	I
Template Known Secondary structure														T	T																					T													T	T	S	S	S	S													T	T					G	G	G			T	T
Template Predicted Secondary structure
Template SS confidence
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
		155	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.		.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure																																																														.
Query SS confidence																																																														.
Query Sequence		I	Y	V	T	G	T	P	G	D	S	A	A	G	L	A	I	L	Q	N	R	L	Q	V	A	D	A	K	D	A	D	Y	L	I	K	R	H	L	R	P	S	P	R	I	L	Q	G	Q	A	L	R	D	L	A	N	S	A	I	D	L	S	.	D	G	L	I	S	D	L	G	H	I	V	K	A	S	D	C	G	A	R
Query Conservation																																																														.
Alig confidence																																.	.	.	.	.	.																									.
Template Conservation																																.	.	.	.	.	.
Template Sequence		L	L	V	S	G	T	L	G	D	H	G	A	T	I	L	N	L	R	E	Q	L	G	L	D	G	E	L	V	S	D	.	.	.	.	.	.	C	A	V	L	T	P	L	I	Q	T	L	R	D	I	P	G	V	K	A	L	R	D	A	T	R	G	G	V	N	A	V	V	H	E	F	A	A	A	C	G	C	G	I	E
Template Known Secondary structure					S	S		S	S											T	T		S		T	T	T					.	.	.	.	.	.													S	S	S										T	T														T
Template Predicted Secondary structure																																.	.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.							200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		234	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.			.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.
Predicted Secondary structure																																																							.	.
Query SS confidence																																																							.	.
Query Sequence		I	D	L	A	L	L	P	F	S	D	A	L	S	R	H	V	E	P	E	Q	A	L	R	W	A	L	S	G	G	E	D	Y	E	L	C	F	T	V	P	E	L	N	R	G	A	L	D	V	A	L	G	H	L	.	.	G	V	P	F	T	C	I	G	Q	M	T	A	D	I	E	G	L	C	F	I	R	D	G	E	P
Query Conservation																																																							.	.
Alig confidence																									.	.																													.	.
Template Conservation																									.	.
Template Sequence		I	S	E	S	A	L	P	V	K	P	A	V	R	G	V	C	E	L	L	G	L	D	A	.	.	L	N	F	A	N	E	G	K	L	V	I	A	V	E	R	N	A	A	E	Q	V	L	A	A	L	H	S	H	P	L	G	K	D	A	A	L	I	G	E	V	V	E	R	K	G	V	R	L	A	G	L	Y	G	V	K
Template Known Secondary structure				T	T	T															T			G	.	.	G	G	S			S	S								G	G	G										T	S	G	G	G	T	T									S	S		S						G	G	G
Template Predicted Secondary structure																									.	.
Template SS confidence
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		312	.	.	.	.	.	.	.	320	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	T	L	D	W	K	G	Y	D	H	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	T	L	D	L	P	H	A	E	P	L
Template Known Secondary structure								S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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