Job Description P0AGG0 Confidence 100.00% Date Thu Jan 5 11:29:00 GMT 2012 Rank 3 Aligned Residues 287 % Identity 34% Template c1vqvB_ PDB info PDB header:transferase Chain: B: PDB Molecule:thiamine monophosphate kinase; PDBTitle: crystal structure of thiamine monophosphate kinase (thil)2 from aquifex aeolicus Resolution 2.65 Å

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		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		C	G	E	F	S	L	I	A	R	Y	F	D	R	V	R	S	S	R	L	D	V	E	L	G	I	G	D	D	C	A	L	L	N	I	P	E	K	Q	T	L	A	I	S	T	D	T	L	V	A	G	N	H	F	L	P	D	I	D	P	A	D	L	A	Y	K	A	L	A	V	N	L	S	D	L	A	A	M	G	A	D
Query Conservation
Alig confidence																		.	.	.	.	.	.	.											.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.											.	.	.	.	.
Template Sequence		L	G	E	F	G	L	I	D	L	I	K	K	T	L	E	S	.	.	.	.	.	.	.	K	V	I	D	D	T	A	P	V	E	.	.	.	.	.	K	L	L	L	T	T	D	V	L	N	E	G	V	H	F	L	R	S	Y	I	P	E	A	V	G	W	K	A	I	S	V	N	V	S	D	V	I	A	N	G	G	L
Template Known Secondary structure																T		.	.	.	.	.	.	.	T	T				B					.	.	.	.	.											B	T	T	T	B		T	T	S																			T	T	T
Template Predicted Secondary structure																		.	.	.	.	.	.	.											.	.	.	.	.
Template SS confidence
		6	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.								.	.	.	.	.	.	.	.	30	.						.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
		83	.	.	.	.	.	.	90	.	.	.		.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure													.
Query SS confidence													.
Query Sequence		P	A	W	L	T	L	A	L	T	L	P	.	D	V	D	E	A	W	L	E	S	F	S	D	S	L	F	D	L	L	N	Y	Y	D	M	Q	L	I	G	G	D	T	T	R	G	P	L	S	M	T	L	G	I	H	G	F	V	P	M	G	R	A	L	T	R	S	G	A	K	P	G	D	W	I	Y	V	T	G	T	P
Query Conservation													.
Alig confidence													.																																			.
Template Conservation																																																.
Template Sequence		P	K	W	A	L	I	S	L	N	L	P	E	D	L	E	V	S	Y	V	E	R	F	Y	I	G	V	K	R	A	C	E	F	Y	K	C	E	V	V	G	G	N	I	S	K	S	E	.	K	I	G	I	S	V	F	L	V	G	E	T	E	R	F	V	G	R	D	G	A	R	L	G	D	S	V	F	V	S	G	T	L
Template Known Secondary structure													T	T	S																				T												S	.	S												S	S				S	S				T	T							S		S
Template Predicted Secondary structure																																																.
Template SS confidence
		79	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.		.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	D	S	A	A	G	L	A	I	L	Q	N	R	L	Q	V	A	D	A	K	D	A	D	Y	L	I	K	R	H	L	R	P	S	P	R	I	L	Q	G	Q	A	L	R	D	L	A	N	S	A	I	D	L	S	D	G	L	I	S	D	L	G	H	I	V	K	A	S	D	C	G	A	R	I	D	L	A	L	L	P	F
Query Conservation
Alig confidence																				.
Template Conservation																				.
Template Sequence		G	D	S	R	A	G	L	E	L	L	L	X	E	K	E	E	Y	E	.	P	F	E	L	A	L	I	Q	R	H	L	R	P	T	A	R	I	D	Y	V	K	H	I	Q	K	Y	A	N	A	S	X	D	I	S	D	G	L	V	A	D	A	N	H	L	A	Q	R	S	G	V	K	I	E	I	L	S	E	K	L	P	L
Template Known Secondary structure		S											T	T		S	S			.												S					G	G	G									S							S													T	T							G	G	G	S
Template Predicted Secondary structure																				.
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.		.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
		242	.	.	.	.	.	.	.	250			.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.
Predicted Secondary structure											.	.
Query SS confidence											.	.
Query Sequence		S	D	A	L	S	R	H	V	E	.	.	P	E	Q	A	L	R	W	A	L	S	G	G	E	D	Y	E	L	C	F	T	V	P	E	L	N	R	G	A	L	D	V	A	L	G	H	L	G	V	P	F	T	C	I	G	Q	M	T	A	D	I	E	G	L	C	F	I	R	D	G	E	P	V	T	L
Query Conservation											.	.
Alig confidence											.	.																														.	.	.	.	.	.	.	.																		.	.	.
Template Conservation																																										.	.	.	.	.	.	.	.																		.	.	.
Template Sequence		S	N	E	L	K	X	Y	C	E	K	Y	G	K	N	P	I	E	Y	A	L	F	G	G	E	D	Y	Q	L	L	F	T	H	P	K	E	R	W	N	P	F	.	.	.	.	.	.	.	.	L	D	X	T	E	I	G	R	V	E	E	G	E	G	V	F	V	.	.	.	D	G	K	K	V	E	P
Template Known Secondary structure												T	T									S													G	G	G			S	S	.	.	.	.	.	.	.	.	S										S	S	S					.	.	.	T	T
Template Predicted Secondary structure																																										.	.	.	.	.	.	.	.																		.	.	.
Template SS confidence
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.									.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.				.	.	.	.	.	.	300

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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