Job Description P0A7Z0 Confidence 97.81% Date Thu Jan 5 11:06:29 GMT 2012 Rank 30 Aligned Residues 108 % Identity 16% Template c3rrlC_ PDB info PDB header:transferase Chain: C: PDB Molecule:succinyl-coa:3-ketoacid-coenzyme a transferase subunit a; PDBTitle: complex structure of 3-oxoadipate coa-transferase subunit a and b from2 helicobacter pylori 26695 Resolution 2.29 Å

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		11	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30				.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.
Predicted Secondary structure																						.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																						.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	W	A	A	L	Q	Y	V	Q	P	G	T	I	V	G	V	G	T	G	S	.	.	.	T	A	A	H	F	I	D	A	L	G	T	M	K	G	Q	I	E	G	A	V	S	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																						.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																						.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		L	D	K	A	L	S	A	L	K	D	G	D	T	I	L	V	G	G	F	G	L	C	G	I	P	E	Y	A	I	D	Y	I	Y	K	K	G	I	K	D	L	I	V	V	S	N	N	C	G	V	D	D	F	G	L	G	I	L	L	E	K	K	Q	I	K	K	I	I	A	S	Y	V	G	E	N	K	I	F	X	L	N
Template Known Secondary structure							T	T			T	T								B	T	T	B	T													T			S						S				B	T	T	B	T	T					T	T	T								S			T	T		S				T	T
Template Predicted Secondary structure
Template SS confidence
		8	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.
														54	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.									70	.	.	.	.																	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	D	A	S	T	E	K	L	K	S	L	G	I	H	V	F	D	.	.	.	.	.	.	.	.	L	N	E	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	L	G	I	Y	V	D	G	A	D	E	I	N	G	H	M	Q	M	I	K	G	G	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.
Template Conservation																																																																														.
Template Sequence		G	E	I	E	V	V	L	T	P	Q	G	T	L	A	E	N	L	H	A	G	G	A	G	I	P	A	Y	Y	T	P	T	G	V	G	T	L	I	A	Q	G	K	E	S	R	E	F	N	G	K	E	Y	I	L	E	R	A	I	T	G	D	Y	G	L	I	K	A	Y	K	S	D	T	L	G	N	L	V	.	F	R	K
Template Known Secondary structure		S	S	S																				T							S	T	T	T	T	S	G	G	G	T	T	S						T	T																			S				T	T					.			G
Template Predicted Secondary structure																																																																														.
Template SS confidence
		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.		.	.	.
		98	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	A	L	T	R	E	K	I	I	A	S	V	A	E	K	F	I	C	I	A	D	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	A	R	N	F	N	P	L	C	A	X	A	A	K	I	C	V	A	E	V	E	E
Template Known Secondary structure		G	G		T	T							T									S
Template Predicted Secondary structure
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions