 |
Job Description | P0A7Z0 | Confidence | 33.54% | Date | Thu Jan 5 11:06:29 GMT 2012 |
Rank | 99 | Aligned Residues | 74 |
% Identity | 8% | Template | c3nd1B_ |
PDB info |
PDB header:transferase | Chain: B: PDB Molecule:precorrin-6a synthase/cobf protein; |
PDBTitle: crystal structure of precorrin-6a synthase from rhodobacter capsulatus
|
Resolution | 1.50 Å |
|
 |
  |   |
3 | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | |
. | . | . | . | . | . | . | . | |
|
|
|
|
30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
| . |
|  |  |  |  |
|
|
| . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | D | E | L | K | K | A | V | G | W | A | A | L | Q | Y | V | Q | P | G | . |
T | I | V | G | V | G | T | G | . |
. |
. |
. |
. |
S | T | A | A | H | F | I | D | A | L | G | T | M | K | G | Q | I | E | G | A | V | S | S | S | D | A | S | T | E | K | L | K | S | L | G | I | H | V | F | D | L | N | E | V | D | S | L |
Query Conservation |   |
  |   |   |   |
|   |   |
|
|   |   |
|   |   |   |
|   |
|
| . |   |   |
|
|
|
|
|
| . | . | . | . | . |
|
|   |   |   |
|   |   |   |
|   |   |   |   |   |   |   |
|   |
|
|
|   |
|   |   |
|   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |
|   |   |
|
|
|   |
|
|   |   |   |   |   |
|   |   |   |
|   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |
|
|
|
|   |   |
|
|
|
|   |   |   |   |   |   |   |   |
|
Template Sequence |   |
D | A | I | A | E | T | W | L | S | E | I | T | A | H | V | P | G | L | E | G | R | V | A | L | L | V | W | G | D | P | S | L | Y | D | S | T | L | R | I | A | E | R | L | K | S | R | L | P | L | T | T | K | V | I | P | G | I | T | A | I | Q | A | L | C | A | A | H | A | I | P | L | N | D | I | G | A | P | V | V | I |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  | S | T | T |
|
|  |  |  |  |  |  |  | S | B |
| T | T | S | S |
| S |  |  |  |  |  |  |  |  | T | T | T | S |
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  | T |
|
| S | S |
| T | T |
|
|
|  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
86 | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|