Job Description P0A7Z0 Confidence 98.81% Date Thu Jan 5 11:06:29 GMT 2012 Rank 22 Aligned Residues 121 % Identity 15% Template c3ecsD_ PDB info PDB header:translation Chain: D: PDB Molecule:translation initiation factor eif-2b subunit PDBTitle: crystal structure of human eif2b alpha Resolution 2.65 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.		.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.							.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.
Predicted Secondary structure																									.																													.	.	.	.	.	.																				.	.	.
Query SS confidence																									.																													.	.	.	.	.	.																				.	.	.
Query Sequence		D	E	L	K	K	A	V	G	W	A	A	L	Q	Y	V	Q	P	G	T	I	V	G	V	.	G	T	G	S	T	A	A	H	F	I	D	A	L	G	T	M	K	G	Q	I	E	G	A	V	S	S	S	D	.	.	.	.	.	.	A	S	T	E	K	L	K	S	L	G	I	H	V	F	D	L	N	E	V	.	.	.
Query Conservation																									.																													.	.	.	.	.	.																				.	.	.
Alig confidence																									.																													.	.	.	.	.	.																				.	.	.
Template Conservation
Template Sequence		S	L	S	R	N	K	I	A	D	L	C	H	T	F	I	K	D	G	A	T	I	L	T	H	A	Y	S	R	V	V	L	R	V	L	E	A	A	V	A	A	K	K	R	F	S	V	Y	V	T	E	S	Q	P	D	L	S	G	K	K	X	A	K	A	L	C	H	L	N	V	P	V	T	V	V	L	D	A	A	V	G
Template Known Secondary structure														T	T			T	T							S															T	T											T	T	T	T											T	T	T								G	G	G
Template Predicted Secondary structure
Template SS confidence
		105	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.
					74	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.
Predicted Secondary structure		.	.	.
Query SS confidence		.	.	.
Query Sequence		.	.	.	D	S	L	G	I	Y	V	D	G	A	D	E	I	N	G	H	M	Q	M	I	K	G	G	G	A	A	L	T	R	E	K	I	I	A	S	V	A	E	K	F	I	C	I	A	D	A	S	K	Q	V	D	I
Query Conservation		.	.	.
Alig confidence		.	.	.																														.
Template Conservation																																		.
Template Sequence		Y	I	X	E	K	A	D	L	V	I	V	G	A	E	G	V	V	E	N	G	G	I	I	N	K	I	G	T	N	Q	X	A	.	V	C	A	K	A	Q	N	K	P	F	Y	V	V	A	E	S	F	K	F	V	R	L
Template Known Secondary structure				G	G	G		S							S				T	T	S						T	T						.						T	T									G	G	G	B		S
Template Predicted Secondary structure																																		.
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.		.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions