Job Description P0A7Z0 Confidence 60.21% Date Thu Jan 5 11:06:29 GMT 2012 Rank 71 Aligned Residues 90 % Identity 16% Template c1i1gA_ PDB info PDB header:transcription Chain: A: PDB Molecule:transcriptional regulator lrpa; PDBTitle: crystal structure of the lrp-like transcriptional regulator from the2 archaeon pyrococcus furiosus Resolution 2.90 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		103	.	.	.	.	.	.	110	.	.		.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
Predicted Secondary structure												.
Query SS confidence												.
Query Sequence		E	K	I	I	A	S	V	A	E	K	.	F	I	C	I	A	D	A	S	K	Q	V	D	I	L	G	K	F	P	L	P	V	E	V	I	P	M	A	R	S	A	V	A	R	Q	L	V	K	L	G	G	R	P	E	Y	R	Q	G	V	V	T	D	N	G	N	V	I	L	D	V	H	G	M	E	I	L	D	P	I	A
Query Conservation												.
Alig confidence												.																.																								.	.
Template Conservation																												.																								.	.
Template Sequence		K	A	L	E	E	K	G	I	I	E	G	Y	T	I	K	I	N	P	K	K	L	G	Y	S	L	V	.	T	I	T	G	V	D	T	K	P	E	K	L	F	E	V	A	E	K	L	K	E	Y	D	.	.	F	V	K	E	L	Y	L	S	S	G	D	H	M	I	M	A	V	I	W	A	K	D	G	E	D	L	A	E
Template Known Secondary structure								T	S	S									S	G	G	G	T					.									G	G	G											S	T	.	.	T								S	S	S	S	S								S	S
Template Predicted Secondary structure																												.																								.	.
Template SS confidence
		40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.		.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.			.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.
			182	.	.	.	.	.	.	.	190	.	.	.	.	.
Predicted Secondary structure		.
Query SS confidence		.
Query Sequence		.	M	E	N	A	I	N	A	I	P	G	V	V	T	V
Query Conservation		.
Alig confidence		.
Template Conservation
Template Sequence		I	I	S	N	K	I	G	K	I	E	G	V	T	K	V
Template Known Secondary structure						T	T	T	T	S	T	T
Template Predicted Secondary structure
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions