 |
Job Description | P0A890 | Confidence | 12.14% | Date | Thu Jan 5 11:07:12 GMT 2012 |
Rank | 62 | Aligned Residues | 52 |
% Identity | 17% | Template | c3qq5A_ |
PDB info |
PDB header:oxidoreductase | Chain: A: PDB Molecule:small gtp-binding protein; |
PDBTitle: crystal structure of the [fefe]-hydrogenase maturation protein hydf
|
Resolution | 2.99 Å |
|
 |
  |   |
22 | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | |
|
|
|
|
|
|
. | . | . | . | . | . | . | . | |
60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |  | . | . | . | . | . | . | . |  |  |  |  |  |  |  |
| . |
|
|  |  |  |  |  |  |  |
|
|
|  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | V | M | M | V | R | K | T | V | R | N | M | Q | P | G | E | T | L | L | I | I | A | D | D | P | A | T | T | R | D | . |
. |
. |
. |
. |
. |
. |
I | P | G | F | C | T | F | M | . |
E | H | E | L | V | A | K | E | T | D | G | L | P | Y |
Query Conservation |   |
|   |
|   |   |   |   |
|
|   |   |
|   |   |
|   |   |
|   |
|   |   |
|
|   |   |
|   |   |
| . | . | . | . | . | . | . |
|   |   |   |   |   |   |   | . |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |
|   |   |   |   |   |   |
|   |   |   |   |   |
|
|
|   |
|   |
|   |
|   |   |   |   |   |
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
Template Sequence |   |
Y | F | V | E | S | V | R | K | I | E | E | L | E | D | G | D | T | V | V | I | M | E | G | C | T | H | R | P | L | T | E | D | I | G | R | V | K | I | P | R | W | L | V | N | H | T | G | A | Q | L | N | F | K | V | I | A | G | K | D | F |
Template Known Secondary structure |   |
 |  |  |  |  |  |  | T | T | T | T |
|
| T | T |
|  |  |  |  |  |
|
| S |
|
|
|
| S | S |
|
| T | T | T | T |  |  |  |  |  |  |  |  |  | S |
| S |
|
|  |  |  |  |  |
| S | S | S |
|
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
279 | 280 | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|