Job Description P0A890 Confidence 47.28% Date Thu Jan 5 11:07:12 GMT 2012 Rank 30 Aligned Residues 34 % Identity 12% Template c2aivA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:fragment of nucleoporin nup116/nsp116; PDBTitle: multiple conformations in the ligand-binding site of the2 yeast nuclear pore targeting domain of nup116p Resolution UNK

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		44	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	D	P	A	T	T	R	D	I	P	G	F	C	T	F	M	E	H	E	L	V	A	K	E	T	D	G	L	P	Y	R	Y	L	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		N	H	Q	L	V	K	R	H	I	E	R	L	K	K	N	P	N	S	K	F	E	S	Y	D	A	D	S	G	T	Y	V	F	I	V
Template Known Secondary structure		T		S	S												T	T	S							T	T	T
Template Predicted Secondary structure
Template SS confidence
		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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