|   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | |
. | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| . |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | A | L | L | D | F | F | L | S | R | K | K | N | T | A | N | I | A | K | E | R | L | Q | I | I | V | A | E | R | R | R | S | D | . |
A | E | P | H | Y | L | P | Q | L | R | K | D | I | L | E | V | I | C | K | Y | V | Q | I | D | P | E | M | V | T | V | Q | L | E | Q | K | D | G | D | I | S | I | L | E | L | N | V |
Query Conservation |   |
|   |
|
|   |   |
|   |   |   |
|   |   |
|
|   |   |
|
|
|
|
|
|
|
|
|
|   |
|
|   |   |   | . |   |   |
|   |   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |
|
|   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |   |   |
|   |   |   |
|   |   |
|
|   |
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |   |   |   |   |
|
|   |   |
|   |   |
|
|   |
|
|
|   |
|
|
|
|
|
|   |
|
|   |   |   |
|   |
|   |
|   |   | . |   |   |   |   |   |   |
|   |   |
|
|
Template Sequence |   |
M | S | L | I | E | L | L | F | G | R | K | Q | K | T | A | T | V | A | R | D | R | L | Q | I | I | I | A | Q | E | R | A | Q | E | G | Q | T | P | D | Y | L | P | T | L | R | K | A | L | M | E | V | L | S | K | Y | V | N | V | S | L | D | N | I | R | I | S | Q | E | K | . |
Q | D | G | M | D | V | L | E | L | N | I |
Template Known Secondary structure |   |
|
|  |  |  |  |  | T |
| S | S |
|
|
| S |
|
| S | S |  |  |  |  |  |  |  |  |  |  |
|
| S | S |
|
|
|
|
| S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|
|
| T | T | S |  |  |  |  |  |  |  | . |  | T | T |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  | . |
|
|
|  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | |
. | 70 | . | . | . | . | . | . | . | . | . |
  |
  |   |
80 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
Query Sequence |   |
T | L | P | E | A | E | E | L |
Query Conservation |   |
  |
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
Template Conservation |   |
  |
|
|   |   |   |   |   |
Template Sequence |   |
T | L | P | E | Q | K | K | V |
Template Known Secondary structure |   |
 |  |
|
|
|
|
|
|
Template Predicted Secondary structure |   |
 |
|
|
|  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
  |   |
80 | . | . | . | . | . | . | . |
  |