Job Description P77154 Confidence 99.63% Date Thu Jan 5 12:25:42 GMT 2012 Rank 11 Aligned Residues 305 % Identity 10% Template c3cihA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:putative alpha-rhamnosidase; PDBTitle: crystal structure of a putative alpha-rhamnosidase from2 bacteroides thetaiotaomicron Resolution 2.33 Å

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		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.					.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure																																																																			.	.	.	.
Query SS confidence																																																																			.	.	.	.
Query Sequence		V	A	D	I	A	W	A	V	I	Q	Y	W	Q	T	T	G	D	E	S	F	I	A	H	E	G	M	A	L	L	L	E	T	A	K	F	W	I	S	R	A	V	R	V	N	D	R	L	E	I	H	D	V	I	G	P	D	E	Y	T	E	H	V	N	N	N	.	.	.	.	A	Y	T	S	Y	M	A	R	Y	N	V
Query Conservation																																																																			.	.	.	.
Alig confidence																										.																																									.	.	.	.
Template Conservation																										.
Template Sequence		T	F	Y	W	F	L	S	V	Y	D	Y	Y	X	Y	S	G	D	R	H	F	V	N	Q	L	.	Y	P	R	X	Q	T	X	X	D	Y	V	L	G	R	T	N	K	N	G	X	V	E	G	X	S	G	D	W	V	F	V	D	W	A	D	G	Y	L	D	K	K	G	E	L	S	F	E	Q	V	L	F	C	R	S	L
Template Known Secondary structure																										.													T	T	B		T	T	S		B				T	T		B			S				T	T					S	S
Template Predicted Secondary structure																										.
Template SS confidence
		386	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.		410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.						.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.	.	.	.
Query SS confidence																																.	.	.	.	.
Query Sequence		Q	Q	A	L	N	I	A	R	Q	F	G	C	S	D	D	A	F	I	H	R	A	E	M	F	L	K	E	L	W	M	.	.	.	.	.	P	E	I	Q	P	D	G	V	L	P	Q	D	D	S	F	M	A	K	P	A	I	N	L	A	K	Y	K	A	A	A	G	K	Q	T	I	L	L	D	Y	S	R	A	E	V	N
Query Conservation																																.	.	.	.	.
Alig confidence													.	.																		.	.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	X	A	L	C	A	D	L	V	G	.	.	D	K	D	G	Q	Q	K	Y	E	K	L	A	S	A	L	K	A	K	L	E	P	T	F	W	N	N	Q	K	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	A	F	V	H	N	C	V	D	G	R	Q
Template Known Secondary structure												T	.	.																										T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				S				T	T
Template Predicted Secondary structure													.	.																														.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		465	.	.	.	.	470	.	.	.	.	.			.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.																												.	.	.	.	.	510	.	.	.	.	.
		568	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	M	Q	I	L	K	Q	A	D	V	V	M	L	N	Y	M	L	P	E	Q	F	S	A	A	S	C	L	A	N	L	Q	F	Y	E	P	R	T	I	H	D	S	S	L	S	K	A	I	H	G	I	V	A	A	R	C	G	L	L	T	Q	S	Y	Q	F	W	R	E	G	T	E	I	D	L	G	A	D	P	H	S	C
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	D	A	V	T	R	Y	A	N	X	F	S	V	F	F	D	Y	L	N	A	D	K	Q	Q	A	I	K	Q	S	V	L	L	N	D	E	I	L	K	I	T	T	P	Y	X	R	F	Y	E	L	E	A	L	C	A	L	G	E	Q	E	T	V	X	K	E	X	K	A	Y	W	G	G	X	L	K	A	G	A	T	S	F
Template Known Secondary structure			S													T	T		S												T	T	T		T	T	S					S														T	T																		T	T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.
		648	.	650																							.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.				.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Query Sequence		D	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	A	A	A	T	G	A	I	W	L	G	A	I	Q	G	F	A	G	V	S	V	R	D	.	.	.	G	E	L	H	L	N	P	A	L	P	E	Q	W	Q	Q	L	S	F	P	L	F	W	Q	G	C	E	L	Q
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.			.																						.	.	.											.
Template Conservation																													.																																			.
Template Sequence		W	E	K	Y	N	P	E	E	S	G	T	Q	H	L	A	X	Y	G	R	P	Y	G	K	S	L	C	H	.	A	W	G	A	S	P	I	Y	L	L	G	K	Y	Y	L	G	V	K	P	T	K	E	G	Y	K	E	F	A	V	S	P	V	L	G	.	G	L	K	W	X	E	G	T	V	P	T	P	N	G	D	I	H
Template Known Secondary structure			S				T	T			G	G	G	G	G		B	T	T	B	T	T		S		S	S	B	.	G	G	G		T									T	S							G	G	G	T									T	.	T		S									T	T
Template Predicted Secondary structure																													.																																			.
Template SS confidence
		596	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.		.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.		.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.
		703	.	.	.	.	.	.	710	.	.	.			.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		V	T	L	D	A	Q	R	I	A	I	R	.	.	T	S	A	P	V	S	L	R	L	N	G	Q	L	I	T	V	A	E	E	S	V	F	C	L	G	D	F	I	L	P	F	N	G	T	A	T	K	H	Q	E
Query Conservation													.	.
Alig confidence													.	.
Template Conservation
Template Sequence		V	Y	X	D	N	K	T	I	K	V	K	A	T	E	G	K	G	Y	L	T	I	Q	S	R	R	Q	P	K	A	N	X	G	T	V	E	K	V	S	E	G	V	W	R	L	W	I	D	S	P	E	E	R	I
Template Known Secondary structure						S	S							S	S										S	S					S	S	S							T	T								S	S	S
Template Predicted Secondary structure
Template SS confidence
		674	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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