Job Description P77154 Confidence 95.60% Date Thu Jan 5 12:25:42 GMT 2012 Rank 23 Aligned Residues 220 % Identity 15% Template c2vn4A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:glucoamylase; PDBTitle: glycoside hydrolase family 15 glucoamylase from hypocrea2 jecorina Resolution 1.85 Å

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		290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.								.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.
Predicted Secondary structure																																			.	.	.	.	.	.	.
Query SS confidence																																			.	.	.	.	.	.	.
Query Sequence		E	A	H	D	Q	Q	A	L	D	Y	A	L	Y	H	L	R	I	M	T	P	A	H	D	E	R	S	S	I	A	A	K	G	L	.	.	.	.	.	.	.	T	G	E	G	Y	K	G	H	V	F	W	D	T	E	V	F	L	L	P	F	H	L	F	S	D	P	T	V	A	R	S	L	L	R	Y	R	W	H	N	L
Query Conservation																																			.	.	.	.	.	.	.
Alig confidence																																			.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	D	F	I	S	T	E	T	P	I	A	L	N	N	L	L	C	N	V	G	P	D	G	C	R	A	F	G	T	S	A	G	A	V	I	A	S	P	S	T	I	D	P	D	Y	Y	Y	M	W	T	R	D	S	A	L	V	F	K	N	L	I	D	R	F	T	E	T	Y	D	A	G	L	Q	R	R	I	E	Q	Y	I
Template Known Secondary structure																		T	T	B	T	T	T		T	T	S	T	T	S		T	T		B		S		S			S	S	S				S																				S	B
Template Predicted Secondary structure
Template SS confidence
		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		363	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.				.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.				.	.	.	.	.
Predicted Secondary structure																																																				.	.	.																				.	.	.
Query SS confidence																																																				.	.	.																				.	.	.
Query Sequence		P	G	A	Q	E	K	A	R	R	N	G	W	Q	G	A	L	F	P	W	E	S	A	R	S	G	E	E	E	T	P	E	F	A	A	I	N	I	R	T	G	L	R	Q	K	V	A	S	A	Q	A	.	.	.	E	H	H	L	V	A	D	I	A	W	A	V	I	Q	Y	W	Q	T	T	.	.	.	G	D	E	S	F
Query Conservation																																																				.	.	.																				.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.																				.	.	.
Template Conservation																.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		T	A	Q	V	T	L	Q	G	L	S	N	P	S	G	.	.	.	.	.	.	.	.	.	.	.	.	S	L	A	D	G	S	G	L	G	E	P	K	F	E	L	T	L	K	P	F	T	G	N	W	G	R	P	Q	R	D	G	P	A	L	R	A	I	A	L	I	G	Y	S	K	W	L	I	N	N	N	Y	Q	S	T
Template Known Secondary structure												B	T	T	B	.	.	.	.	.	.	.	.	.	.	.	.		S	T	T	S	G	G	G	G						T	T	S		B			S			S				T																				T	T
Template Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.													.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150
		437	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	A	H	E	G	M	A	L	L	L	E	T	A	K	F	W	I	S	R	A	V	R	V	N	D	R	L	E	I	H	D	V	I	G	P	D	E	Y	T	E	H	V	N	N	N	A	Y	T	S	Y	M	A	R	Y	N	V	Q	Q	A	L	N	I	A	R	Q	F	G	C	S	D	D	A	F	I	H	R	A	E	M	F
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.
Template Sequence		V	S	N	V	I	W	P	I	V	R	N	D	L	N	Y	V	A	Q	Y	.	.	.	.	.	.	.	.	.	.	W	N	Q	T	G	F	D	L	W	E	E	V	N	G	S	S	F	F	T	V	A	N	Q	H	R	A	L	V	E	G	A	T	L	A	A	T	L	G	Q	S	G	S	A	Y	S	S	V	A	P	Q	V
Template Known Secondary structure						T															.	.	.	.	.	.	.	.	.	.	T	T	S					T	T	S																												T
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		151	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.											170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		517	.	.	520	.	.	.	.	.	.	.	.	.	530	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	K	E	L	W	M	P	E	I	Q	P	D	G	V	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	C	F	L	Q	R	F	W	V	S	S	G	G	Y	V
Template Known Secondary structure						G	G	G			T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions