Job Description P77154 Confidence 5.57% Date Thu Jan 5 12:25:42 GMT 2012 Rank 70 Aligned Residues 127 % Identity 13% Template c2v8kA_ PDB info PDB header:lyase Chain: A: PDB Molecule:pectate lyase; PDBTitle: structure of a family 2 pectate lyase in complex with2 trigalacturonic acid Resolution 2.10 Å

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		286	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.																				.	340	.	.	.	.	.	.
Predicted Secondary structure																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	N	G	G	E	A	H	D	Q	Q	A	L	D	Y	A	L	Y	H	L	R	I	M	T	P	A	H	D	E	R	S	S	I	A	A	K	G	L	T	G	E	G	Y	K	G	H	V	F	W	D	T	E	V	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	L	P	F	H	L	F	S
Query Conservation																																																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	S	G	D	P	R	Y	Q	K	R	A	E	D	I	V	R	Y	H	F	Q	N	Y	Q	D	P	S	G	L	L	Y	.	.	.	.	.	.	.	.	.	.	.	W	G	G	H	R	F	V	D	L	K	T	L	Q	P	E	G	P	S	E	K	E	M	V	H	E	L	K	N	A	Y	P	Y	Y	D	L	M	F	S	V
Template Known Secondary structure						T																	S	B		T	T	S		B	S	.	.	.	.	.	.	.	.	.	.	.		S	T	T					T	T	T								S	S			S	B			S	S
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.												.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.
		347	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.						.	.	420	.
Predicted Secondary structure																																																																									.	.	.	.	.
Query SS confidence																																																																									.	.	.	.	.
Query Sequence		D	P	T	V	A	R	S	L	L	R	Y	R	W	H	N	L	P	G	A	Q	E	K	A	R	R	N	G	W	Q	G	A	L	F	P	W	E	S	A	R	S	G	E	E	E	T	P	E	F	A	A	I	N	I	R	T	G	L	R	Q	K	V	A	S	A	Q	A	E	H	H	L	V	.	.	.	.	.	A	D	I	A
Query Conservation																																																																									.	.	.	.	.
Alig confidence																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																									.	.	.	.	.
Template Conservation																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	S	D	A	T	A	R	F	I	R	G	F	W	N	A	H	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	Y	D	W	R	I	L	E	T	S	R	H	G	E	Y	G	K	P	M	G	A	L	W	E	S	K	F	E	Q	Q	P	P	F	F	A	T	K	G	L	S	F	L	N	A	G	N	D	L	I
Template Known Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T	T	T				S		B		T	T					S	G	G	G	S							T	T				S	S
Template Predicted Secondary structure																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		145	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160																.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.
		422	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		W	A	V	I	Q	Y	W	Q	T	T	G	D	E	S	F	I	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	S	A	S	L	L	Y	K	H	Q	Q	D	Q	G	A	L	T
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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