Job Description P77154 Confidence 99.66% Date Thu Jan 5 12:25:42 GMT 2012 Rank 10 Aligned Residues 292 % Identity 15% Template c2okxB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:rhamnosidase b; PDBTitle: crystal structure of gh78 family rhamnosidase of bacillus sp. gl1 at2 1.9 a Resolution 1.90 Å

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		417	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.					.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.
Predicted Secondary structure																																																														.	.	.	.
Query SS confidence																																																														.	.	.	.
Query Sequence		V	A	D	I	A	W	A	V	I	Q	Y	W	Q	T	T	G	D	E	S	F	I	A	H	E	G	M	A	L	L	L	E	T	A	K	F	W	I	S	R	A	V	R	V	N	D	R	L	E	I	H	D	V	I	G	P	D	E	Y	T	E	.	.	.	.	H	V	N	N	N	A	Y	T	S	Y	M	A	R	Y	N	V
Query Conservation																																																														.	.	.	.
Alig confidence																										.																.	.																			.	.	.	.
Template Conservation																										.																.	.
Template Sequence		T	F	F	W	I	L	A	C	R	E	Y	A	A	H	T	G	N	E	A	F	A	A	R	I	.	W	P	A	V	K	H	T	L	T	H	Y	L	E	H	I	.	.	D	D	S	G	L	L	N	M	A	G	W	N	L	L	D	W	A	P	I	D	Q	P	N	E	G	I	V	T	H	Q	N	L	F	L	V	K	A	L
Template Known Secondary structure																	T									.													T	T	B	.	.		T	T	S	S	B				S						S	S	S					S
Template Predicted Secondary structure																										.																.	.
Template SS confidence
		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.		.	.	.	.	.	.	660	.	.	.	.	.	.	.	.			.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.
		493	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Q	Q	A	L	N	I	A	R	Q	F	G	C	S	D	D	A	F	I	H	R	A	E	M	F	L	K	E	L	W	M	P	E	I	Q	P	D	G	V	L	P	Q	D	D	S	F	M	A	K	P	A	I	N	L	A	K	Y	K	A	A	A	G	K	Q	T	I	L	L	D	Y	S	R	A	E	V	N	E	M	Q	I	L
Query Conservation
Alig confidence													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	D	S	R	A	L	A	A	A	A	G	.	.	A	T	E	E	A	D	A	F	A	A	R	A	D	L	L	A	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	I	N	A	V	L	W	D	E	E	K	R	A	Y	I	D	C	I	H	A	D	G	R	R	S	D	V	Y	S
Template Known Secondary structure												T	.	.		G	G	G	G													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.						S			T	T	T	T				S				T	T	S		B					B
Template Predicted Secondary structure													.	.																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		707	.	.	710	.	.	.	.	.	.	.			.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.																						.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.
		573	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.		.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																				.																																												.	.
Query SS confidence																																				.																																												.	.
Query Sequence		K	Q	A	D	V	V	M	L	N	Y	M	L	P	E	Q	F	S	A	A	S	C	L	A	N	L	Q	F	Y	E	P	R	T	I	H	.	D	S	S	L	S	K	A	I	H	G	I	V	A	A	R	C	G	L	L	T	Q	S	Y	Q	F	W	R	E	G	T	E	I	D	L	G	A	D	P	H	S	C	D	D	.	.
Query Conservation																																				.																																												.	.
Alig confidence																																				.																																												.	.
Template Conservation
Template Sequence		M	Q	T	Q	V	V	A	Y	L	C	G	V	A	Q	G	E	R	E	A	V	I	E	G	Y	L	S	S	P	P	P	A	F	V	Q	I	G	S	P	F	M	S	F	F	Y	Y	E	A	L	E	K	A	G	R	Q	T	L	M	L	D	D	I	R	R	N	Y	G	Q	M	L	R	Y	D	A	T	T	C	W	E	M	Y
Template Known Secondary structure											T	T		S		T												S			T	T	S	B				S														T	T													T						T	T		S	S			S	S
Template Predicted Secondary structure
Template SS confidence
		764	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.
																	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.				.	.	.	.	.	680	.	.	.	.	.		.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.												.																									.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.												.																									.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	I	H	A	A	A	T	G	A	I	W	L	G	A	I	Q	G	F	A	G	V	S	V	R	D	.	.	.	G	E	L	H	L	N	P	A	L	P	E	.	Q	W	Q	Q	L	S	F	P	L	F	W	Q	G	C	E	L	Q	V	T	L	D	A	Q	R	.
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.												.																									.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																										.	.	.												.															.										.
Template Conservation																																																																							.
Template Sequence		P	N	F	A	E	N	R	S	N	P	D	M	L	T	R	S	H	C	H	A	W	S	A	A	P	G	Y	F	L	G	S	S	I	L	G	V	K	R	G	A	D	G	W	R	T	V	D	I	A	P	Q	P	C	D	L	T	W	A	E	G	V	V	P	L	P	Q	G	G	H	.	I	A	V	S	W	E	F	V	S	A
Template Known Secondary structure		S	S			T	T	S	S	S	T	T	S	S		S		S			G	G	G		T								T	T	S						S	G	G	G	S									T	T		S									T	T	S	S		.										T
Template Predicted Secondary structure																																																																							.
Template SS confidence
		844	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.		.	.	.	.	.	.	.	920	.	.
								710	.	.	.	.	.	.	.	.	.	720	.	.		.	.	.	.	.	.	.	730	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.														.
Query SS confidence		.	.	.	.	.	.														.
Query Sequence		.	.	.	.	.	.	I	A	I	R	T	S	A	P	V	S	L	R	L	.	N	G	Q	L	I	T	V	A	E	E	S	V	F
Query Conservation		.	.	.	.	.	.														.
Alig confidence		.	.	.	.	.	.														.
Template Conservation
Template Sequence		G	K	L	K	L	R	I	E	A	P	E	D	I	E	V	N	V	T	L	P	E	G	I	E	G	E	V	T	Q	V	K	Y	M
Template Known Secondary structure		T										T	T	S								T	T
Template Predicted Secondary structure
Template SS confidence
		923	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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