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Job DescriptionP77154
Confidence99.70%DateThu Jan 5 12:25:42 GMT 2012
Rank9Aligned Residues391
% Identity16%Templatec1ug9A_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:glucodextranase; PDBTitle: crystal structure of glucodextranase from arthrobacter globiformis i42
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   65....70........ .80.........90..... ....100.........110.........120.........130.........140..
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Query Sequence  LVNLPDVVGMEIAI. NGEVFSLSHEAWQRELD. FASGELRRNVVWRTSNGSGYTIASRRFVSADQLPLIALEITITPLDA
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Template Sequence  HADTPNTRELQFAVSDGTSAQRESEQTTRTVELADPKALSYRQTTTDNAGR. WRLTKTYVTD. PRRSTVMLGVTFEVLDG
Template Known Secondary structure  STT
B

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   4950.........60.........70.........80.........90......... 100......... 110.........120......
 
   143......150.........160.........170.........180.........190.........200.......
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Query Sequence  DASVLISTGIDATQTNHGRQHLDETQVRVFGQHLMQGSYTTQDGRSDVAISCCCKVSGDVQQCYT. . . . . . . . . . . . . . .
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Template Sequence  . GDYQLFVLSDPSLAGTS. . . . GGDTGSVTDGALLASDLADAATPVATALVSSVGFGAVANGYVGTSDGWTDLAADGRLD
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GGG
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   127..130.........140... ......150.........160.........170.........180.........190.........200.
 
   208.210.........220.........230.........240.........250.........260.........270.........280..
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Query Sequence  . . . . . AKERRLLQHTSAQLHAGETMTLQKLVWIDWRDDRQAALDEWGSASLRQLEMCAQQSYDQLLAASTENWRQWWQKR
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Template Sequence  NASATAGPGNISQTGQIPLAAGGKTEFSLALGFGAD. . . . . . . . . . TAEALATAKASLGTGYKKVSKSYTGEWKKYLNSL
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   202.......210.........220.........230....... ..240.........250.........260.........270.
 
   283......290.........300.........310 .........320..... ....330... ......340.........350
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Query Sequence  RITVNGGEAHDQQALDYALYHLRIMTPA. . . HDERSSIAAKGLTGE. . . . . . . GYKGHVFW. . DTEVFLLPFHLFSDPTV
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Template Sequence  DAPATSLTGALRTQYDVSLMTVKSHEDKTFPGAFIASL. . TIPWGQAASAETHREGYHAVWARDMYQSVTALLAAGDEEA
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TT

TB
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TTGGGSB
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   272.......280.........290.........300......... 310.........320.........330.........340.........
 
   351........360.........370.........380.........390.........400.........410.........420.........430
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Query Sequence  ARSLLRYRWHNLPGAQEKARRNGWQGALFPWESARSGEEETPEFAAINIRTGLRQKVASAQAEHHLVADIAWAVIQYWQT
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Template Sequence  AARGVEWL. . . . . . . . . . FTYQQQPDGHFPQTSRVDGT. . . . . . . . . . . . . . . . . . IGQNGIQLDETAFPILLANQI. . G
Template Known Secondary structure  ..........T

TTS


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   350....... ..360.........370....... ..380.........390........ .
 
   431........440.........450.........460.........470.........480.........490.........500.........510
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Query Sequence  TGDESFIAHEGMALLLETAKFWISRAVRVNDRLEIHDVIGPDEYTEHVNNNAYTSYMARYNVQQALNIARQFGCSDDAFI
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Template Sequence  RTDAGFY. . . . RNELKPAADYLVAAG. . . . . . . . . . PKTPQERWEETGGYSTSTLASQIAALAAAADIAGKNG. . DAGSA
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   400...... ...410.........420. ........430.........440.........450........ .460...
 
   511........520
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Query Sequence  HRAEMFLKEL
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Template Sequence  AVYRATADEW
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   464.....470...
 
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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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