Job Description P30958 Confidence 99.97% Date Thu Jan 5 11:46:49 GMT 2012 Rank 56 Aligned Residues 257 % Identity 19% Template d2bmfa2 SCOP info P-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases RNA helicase Resolution 2.41

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		616	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.		.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.
Predicted Secondary structure																															.
Query SS confidence																															.
Query Sequence		M	C	Q	P	L	A	M	D	R	L	V	C	G	D	V	G	F	G	K	T	E	V	A	M	R	A	A	F	L	.	A	V	D	N	H	K	Q	V	A	V	L	V	P	T	T	L	L	A	Q	Q	H	Y	D	N	F	R	D	R	F	A	N	W	P	V	R	I	E	M	I	S	R	F	R	S	A	K	E	Q	T	Q
Query Conservation																															.
Alig confidence							.	.																							.																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation							.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	R	K	K	R	.	.	L	T	I	M	D	L	H	P	G	A	G	K	T	K	R	Y	L	P	A	I	V	R	E	A	I	K	R	G	L	R	T	L	I	L	A	P	T	R	V	V	A	A	E	M	E	E	A	L	R	G	L	P	I	R	Y	Q	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S	S	T	T		.	.								T	T	S	S	T	T	T	T													T								S	S											T	T	T	S			B			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure							.	.																																																									.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.			.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
		695	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.					.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.						.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.																									.	.	.	.	.
Query SS confidence																						.	.	.	.																									.	.	.	.	.
Query Sequence		I	L	A	E	V	A	E	G	K	I	D	I	L	I	G	T	H	K	L	L	.	.	.	.	Q	S	D	V	K	F	K	D	L	G	L	L	I	V	D	E	E	H	R	F	G	V	R	H	.	.	.	.	.	K	E	R	I	K	A	M	R	A	N	V	D	I	L	T	L	T	A	T	P	I	P	R	T	L	N	M
Query Conservation																						.	.	.	.																									.	.	.	.	.
Alig confidence		.	.	.	.	.	.															.	.	.	.																									.	.	.	.	.																								.	.	.	.
Template Conservation		.	.	.	.	.	.																																																																							.	.	.	.
Template Sequence		.	.	.	.	.	.	T	G	R	E	I	V	D	L	M	C	H	A	T	F	T	M	R	L	L	S	P	I	R	V	P	N	Y	N	L	I	I	M	D	E	A	H	F	T	D	P	A	S	I	A	A	R	G	Y	I	S	T	R	V	E	M	G	E	A	A	G	I	F	M	T	A	T	P	P	G	S	.	.	.	.
Template Known Secondary structure		.	.	.	.	.	.					S														T	S	S	S						S						S	T	T			S																	T	S								S	S		T	T		.	.	.	.
Template Predicted Secondary structure		.	.	.	.	.	.																																																																							.	.	.	.
Template SS confidence
								252	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		766	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	M	S	G	M	R	D	L	S	I	I	A	T	P	P	A	R	R	L	A	V	K	T	F	V	R	E	Y	D	S	M	V	V	R	E	A	I	L	R	E	I	L	R	G	G	Q	V	Y	Y	L	Y	N	D	V	E	N	I	Q	K	A	A	E	R	L	A	E	L	V	P	E	A	R	I	A	I	G	H	G	Q	M
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.																																																										.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																																																										.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	R	D	P	F	P	Q	S	N	A	P	I	M	D	E	E	R	E	I	P	E	R	S	W	N	S	G	H	E	W	V	T	D	F	K	G	K	T	V	W	F	V	P	S	I	K	A	G	N	D	I	A	A	C	L	R	K	N	.	.	G	K	K	V	I	Q	L	S	R	K	T
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.			S	S				S	S												S			S	S							S	S		S							S																.	.	T								T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																																																										.	.
Template SS confidence
												322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.			.	380	.	.	.	.	.	.	.	.	.
		846	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.																				.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.
Predicted Secondary structure																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		R	E	R	E	L	E	R	V	M	N	D	F	H	H	Q	R	F	N	V	L	V	C	T	T	I	I	E	T	G	I	D	I	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	T	A	N	T	I	I	I	E	R	A	D	H	F	G	L	A	Q	L	H	Q	L	R	G	R	V	G	R	S
Query Conservation																																		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence							.	.	.	.																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.
Template Conservation							.	.	.	.																																																								.
Template Sequence		F	D	S	E	Y	.	.	.	.	I	K	T	R	T	N	D	W	D	F	V	V	T	T	D	I	S	E	M	G	A	N	F	K	A	E	R	V	I	D	P	R	R	C	M	K	P	V	I	L	T	D	G	E	E	R	V	I	L	A	G	P	M	P	V	.	T	H	S	S	A	A	Q	R	R	G	R	V	G	R	N
Template Known Secondary structure						G	.	.	.	.	G	G	G	G	T	S			S						G	G	G	G	T	T						S																S	S	S												.										T	T	S	S		S
Template Predicted Secondary structure							.	.	.	.																																																								.
Template SS confidence
		390	.	.	.	.					.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.		450	.	.	.	.	.	.	.	.	.	460	.	.	.	.
		907		.	.	910	.	.	.	.	.	.	.	.
Predicted Secondary structure			.
Query SS confidence			.
Query Sequence		H	.	H	Q	A	Y	A	W	L	L	T	P	H
Query Conservation			.
Alig confidence			.
Template Conservation
Template Sequence		P	K	N	E	N	D	Q	Y	I	Y	M	G	E
Template Known Secondary structure		S	S										S
Template Predicted Secondary structure
Template SS confidence
		465	.	.	.	.	470	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions