Return to main results Retrieve Phyre Job Id

Job DescriptionP30958
Confidence96.80%DateThu Jan 5 11:46:49 GMT 2012
Rank187Aligned Residues122
% Identity16%Templated1l8qa2
SCOP infoP-loop containing nucleoside triphosphate hydrolases P-loop containing nucleoside triphosphate hydrolases Extended AAA-ATPase domain
Resolution2.70

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   599600.........610.........620.... .....630.........640.........650.........660.........670......
Predicted Secondary structure 










..














Query SS confidence 

























. .



















































Query Sequence  FETTPDQAQAINAVLSDMCQPLAMDR. . LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANW
Query Conservation     
 

  

  
  
      


..

 



 





  

  
   



 




  

 
    
  

   
Alig confidence 

























..













































......
Template Conservation   


  
                    


 







 

 


                            ......
Template Sequence  FIVGEGNRLAYEVVKEALENLGSLYNPIFIYGSVGTGKTHLLQAAGNEAKKRGYRVIYSSADDFAQAXVEHLKK. . . . . .
Template Known Secondary structure 



TTTTTTTS
SS
SSSSSTT

......
Template Predicted Secondary structure 




















......
Template SS confidence 















































































   88.90.........100.........110.........120.........130.........140.........150.........160.
 
   677..680.........690.........700.........710.........720.........730......... 740.........750
Predicted Secondary structure 



























......




Query SS confidence 






























































. . . . . .










Query Sequence  PVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVKFKDLGLLIVDEEHRFGVRHK. . . . . . ERIKAMRANVD
Query Conservation   
 
  

      
          
  





  

     
  













  
......
 
        
Alig confidence  ..................................




























......










Template Conservation  ..................................              

 



                         
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GTINEFRNXYKSVDLLLLDDVQFLSGKERTQIEFFHIFNTLYLLEK
Template Known Secondary structure  ..................................T
T
S
GGGGTT
TT
Template Predicted Secondary structure  ..................................











Template SS confidence 















































































   162.......170.........180.........190.........200.......
 
   751........760
Predicted Secondary structure 



Query SS confidence 









Query Sequence  ILTLTATPIP
Query Conservation 

 






Alig confidence 









Template Conservation    
       
Template Sequence  QIILASDRHP
Template Known Secondary structure  SS
G
Template Predicted Secondary structure 



Template SS confidence 









   208.210.......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions