Job Description P30958 Confidence 99.31% Date Thu Jan 5 11:46:49 GMT 2012 Rank 139 Aligned Residues 41 % Identity 41% Template c3mlqH_ PDB info PDB header:transferase/transcription Chain: H: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of the thermus thermophilus transcription-repair2 coupling factor rna polymerase interacting domain with the thermus3 aquaticus rna polymerase beta1 domain Resolution 2.91 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		492	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	Y	A	G	M	T	T	L	E	A	G	G	I	T	G	E	Y	L	M	L	T	Y	A	N	D	A	K	L	Y	V	P	V	S	S	L	H	L	I	S	R	Y
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	Y	L	G	L	E	T	R	E	V	L	G	V	K	R	D	Y	L	V	L	R	Y	K	G	E	G	K	L	Y	L	P	V	E	Q	L	P	L	L	K	R	H
Template Known Secondary structure												S	S											T	T	S									S
Template Predicted Secondary structure
Template SS confidence
		334	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions