Job Description P30958 Confidence 84.61% Date Thu Jan 5 11:46:49 GMT 2012 Rank 383 Aligned Residues 85 % Identity 8% Template c3hgtA_ PDB info PDB header:transcription Chain: A: PDB Molecule:hda1 complex subunit 3; PDBTitle: structural and functional studies of the yeast class ii hda12 hdac complex Resolution 2.20 Å

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		796	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	V	V	R	E	A	I	L	R	E	I	L	R	G	G	Q	V	Y	Y	L	Y	N	D	V	E	N	I	Q	K	A	A	E	R	L	A	E	L	V	P	E	A	R	I	A	I	G	H	G	Q	M	R	E	R	E	L	E	R	V	M	N	D	F	H	H	Q	R	F	N	V	L	V	C	T	T	I	I	E	T	G	I
Query Conservation
Alig confidence																																							.	.																									.	.	.	.	.	.	.
Template Conservation																																							.	.																									.	.	.	.	.	.	.
Template Sequence		S	V	L	R	D	L	I	N	L	V	Q	E	Y	E	T	E	T	A	I	V	C	R	P	G	R	T	M	D	L	L	E	A	L	L	L	G	N	.	.	K	V	H	I	K	R	Y	D	G	H	S	I	D	F	S	C	T	V	H	L	F	S	S	E	.	.	.	.	.	.	.	G	I	N	F	T	K	Y	P	I	K
Template Known Secondary structure												T	T	S										S	T											T	T	S	.	.	S						S	S	S						S								S	S	.	.	.	.	.	.	.				T	T	T	S
Template Predicted Secondary structure																																							.	.																									.	.	.	.	.	.	.
Template SS confidence
		117	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.			.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.								.	.	180	.	.	.	.	.	.	.
		876	.	.	.	880	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	I	P	T	A	N	T	I	I	I	E	R	A	D
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	K	A	R	F	D	M	L	I	C	L	D	T	T
Template Known Secondary structure				S			S						S	T	T
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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