Job Description P30958 Confidence 100.00% Date Thu Jan 5 11:46:49 GMT 2012 Rank 50 Aligned Residues 92 % Identity 29% Template c3fpnB_ PDB info PDB header:dna binding protein Chain: B: PDB Molecule:geobacillus stearothermophilus uvrb interaction PDBTitle: crystal structure of uvra-uvrb interaction domains Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.		.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure																																																				.
Query SS confidence																																																				.
Query Sequence		A	L	V	M	K	K	G	Q	R	L	S	R	D	A	L	R	T	Q	L	D	S	A	G	Y	R	H	V	D	Q	V	M	E	H	G	E	Y	A	T	R	G	A	L	L	D	L	F	P	M	G	S	.	E	L	P	Y	R	L	D	F	F	D	D	E	I	D	S	L	R	V	F	D	V	D	S	Q	R	T	L	E	E
Query Conservation																																																				.
Alig confidence																																																				.
Template Conservation
Template Sequence		V	V	S	L	R	V	G	M	E	I	E	R	N	A	L	L	R	R	L	V	D	I	Q	Y	D	R	N	D	I	D	F	R	R	G	T	F	R	V	R	G	D	V	V	E	I	F	P	A	S	R	D	E	H	C	I	R	V	E	F	F	G	D	E	I	E	R	I	R	E	V	D	A	L	T	G	E	V	L	G	E
Template Known Secondary structure							T	T		B													T	T					T	T				T	T						T	T							S	S	T	T										T	T										T	T	T
Template Predicted Secondary structure
Template SS confidence
		158	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	E	A	I	N	L	L	P	A	H	E	F	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	E	H	V	A	I	F	P	A	S	H	F	V
Template Known Secondary structure			S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		238	.	240	.	.	.	.	.	.	.	.	.	250

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions