Job Description P30958 Confidence 97.27% Date Thu Jan 5 11:46:49 GMT 2012 Rank 176 Aligned Residues 136 % Identity 20% Template c3ezkB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:dna packaging protein gp17; PDBTitle: bacteriophage t4 gp17 motor assembly based on crystal2 structures and cryo-em reconstructions Resolution 34.00 Å

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		597	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.		.	.	.	640	.	.	.	.	.	.	.	.		.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.
Predicted Secondary structure																																										.													.
Query SS confidence																																										.													.
Query Sequence		F	P	F	E	T	T	P	D	Q	A	Q	A	I	N	A	V	L	S	D	M	C	Q	P	L	A	M	D	R	L	V	C	G	D	V	G	F	G	K	T	E	.	V	A	M	R	A	A	F	L	A	V	D	N	.	H	K	Q	V	A	V	L	V	P	T	T	L	L	A	Q	Q	H	Y	D	N	F	R	D	R	F	A
Query Conservation																																										.													.
Alig confidence																				.	.	.	.	.										.								.													.
Template Conservation																				.	.	.	.	.										.
Template Sequence		I	K	V	Q	L	R	D	Y	Q	R	D	M	L	K	I	M	S	S	.	.	.	.	.	K	R	M	T	V	C	N	L	S	.	R	Q	L	G	K	T	T	V	V	A	I	F	L	A	H	F	V	C	F	N	K	D	K	A	V	G	I	L	A	H	K	G	S	M	S	A	E	V	L	D	R	T	K	Q	A	I	E
Template Known Secondary structure																				.	.	.	.	.		S								.	T	T	S		T															S	S	S								S	S																T
Template Predicted Secondary structure																				.	.	.	.	.										.
Template SS confidence
		135	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.						.	.	.	.	.	.	.	160	.		.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.
		675	.	.													.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.			.	.	.	.	740
Predicted Secondary structure					.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.
Query SS confidence					.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.
Query Sequence		N	W	P	.	.	.	.	.	.	.	.	.	.	.	.	V	R	I	E	M	I	S	R	F	R	S	A	K	E	Q	T	Q	I	L	A	E	V	A	E	G	K	I	D	I	L	I	G	T	H	K	L	L	Q	S	D	V	K	F	K	D	L	G	L	L	I	V	D	E	E	H	R	F	G	.	.	V	R	H	K	E
Query Conservation					.	.	.	.	.	.	.	.	.	.	.	.																																																											.	.
Alig confidence					.	.	.	.	.	.	.	.	.	.	.	.											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.															.	.
Template Conservation																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template Sequence		L	L	P	D	F	L	Q	P	G	I	V	E	W	N	K	G	S	I	E	L	D	N	G	S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	G	A	Y	A	S	S	P	D	A	V	R	G	N	.	.	.	.	S	F	A	M	I	Y	I	D	E	C	A	F	I	P	N	F	H	D	S	W	L
Template Known Secondary structure		T	S		T	T	T	S				S				T	T					T	T	S			.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														S	.	.	.	.			S						S	G	G	G		S	S
Template Predicted Secondary structure																											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															.	.	.	.
Template SS confidence
		209	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.																	.	.	.	.	.	.	240	.	.	.	.	.	.	.					.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.
		741	.	.				.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.
Predicted Secondary structure					.	.	.
Query SS confidence					.	.	.
Query Sequence		R	I	K	.	.	.	A	M	R	A	N	V	D	I	L	T	L	T	A	T	P	I
Query Conservation					.	.	.
Alig confidence					.	.	.													.
Template Conservation																				.
Template Sequence		A	I	Q	P	V	I	S	S	G	R	R	S	K	I	I	I	T	T	.	T	P	N
Template Known Secondary structure									S	S	S									.
Template Predicted Secondary structure																				.
Template SS confidence
		269	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.		.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions