Return to main results Retrieve Phyre Job Id

Job DescriptionP30958
Confidence94.23%DateThu Jan 5 11:46:49 GMT 2012
Rank267Aligned Residues85
% Identity20%Templatec3cmwA_
PDB info PDB header:recombination/dnaChain: A: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   619620...... ...630.........640.........650.........660.........670.........680.........690......
Predicted Secondary structure 




..




















Query SS confidence 







. .





































































Query Sequence  PLAMDRLV. . CGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQIL
Query Conservation     




.. 



 





  

  
   



 




  

 
    
  

    
 
  

      
     
Alig confidence 







..

















































.....














Template Conservation 






























 

 











 


 







.....













 
Template Sequence  GLPMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNL. . . . . LCSQPDTGEQALEIC
Template Known Secondary structure  STTS
STTSSTT


TTS


TT

GGG
.....

SS
Template Predicted Secondary structure 



















.....



Template SS confidence 















































































   1055....1060.........1070.........1080.........1090.........1100.........1110.... .....1120.........
 
   697. .700........
Predicted Secondary structure  .




Query SS confidence 

.









Query Sequence  AE. VAEGKIDILI
Query Conservation    .   
  



Alig confidence 

.









Template Conservation 
 










Template Sequence  DALARSGAVDVIV
Template Known Secondary structure  T

S
Template Predicted Secondary structure 




Template SS confidence 












   1130.........1140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions