Return to main results Retrieve Phyre Job Id

Job DescriptionP30958
Confidence94.37%DateThu Jan 5 11:46:49 GMT 2012
Rank258Aligned Residues86
% Identity14%Templatec3cmvG_
PDB info PDB header:recombinationChain: G: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures
Resolution4.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   619620.........630.........640.........650.........660.........670.........680.........690........
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  PLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAE
Query Conservation     




 



 





  

  
   



 




  

 
    
  

    
 
  

      
       
Alig confidence 













































....





























Template Conservation 























 





    



 





.... 
  



   
    
   

 
      
Template Sequence  PMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPI. . . . YARKLGVDIDNLLCSQPDTGEQALEICDAL
Template Known Secondary structure  TTS
SSSSSTTS

SS



....T

GGG

SS
Template Predicted Secondary structure 


















....










Template SS confidence 















































































   57..60.........70.........80.........90.........100.. .......110.........120.........130..
 
   699700........
Predicted Secondary structure 




Query SS confidence 









Query Sequence  VAEGKIDILI
Query Conservation     
  



Alig confidence 









Template Conservation     
 
  
 
Template Sequence  ARSGAVDVIV
Template Known Secondary structure  SSS

Template Predicted Secondary structure 



Template SS confidence 









   133......140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions