Return to main results Retrieve Phyre Job Id

Job DescriptionP30958
Confidence91.33%DateThu Jan 5 11:46:49 GMT 2012
Rank312Aligned Residues83
% Identity20%Templatec3cmuA_
PDB info PDB header:recombination/dnaChain: A: PDB Molecule:protein reca; PDBTitle: mechanism of homologous recombination from the reca-2 ssdna/dsdna structures
Resolution4.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   621..... ...630.........640.........650.........660.........670.........680.........690........
Predicted Secondary structure 


..




















Query SS confidence 





. .







































































Query Sequence  AMDRLV. . CGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFANWPVRIEMISRFRSAKEQTQILAE
Query Conservation   




.. 



 





  

  
   



 




  

 
    
  

    
 
  

      
       
Alig confidence 





..

















































.....
















Template Conservation 
 















 

  

 

  














 









 
.....
 











 
 
Template Sequence  PMGRIVEIYGPESSGKTTLTLQVIAAAQREGKTCAFIDAEHALDPIYARKLGVDIDNL. . . . . LCSQPDTGEQALEICDA
Template Known Secondary structure  TTS

TTSSTTT


TTS


TT

TTT
.....

SS
Template Predicted Secondary structure 


















.....




Template SS confidence 















































































   1057..1060.........1070.........1080.........1090.........1100.........1110.... .....1120.........1130.
 
   699700. .......
Predicted Secondary structure 
.



Query SS confidence 


.






Query Sequence  VAE. GKIDILI
Query Conservation     .
  



Alig confidence 


.






Template Conservation 
 








Template Sequence  LARSGAVDVIV
Template Known Secondary structure  T

S
Template Predicted Secondary structure 




Template SS confidence 










   1132.......1140..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions