Return to main results Retrieve Phyre Job Id

Job DescriptionP30958
Confidence95.90%DateThu Jan 5 11:46:49 GMT 2012
Rank217Aligned Residues88
% Identity17%Templatec3bh0A_
PDB info PDB header:replicationChain: A: PDB Molecule:dnab-like replicative helicase; PDBTitle: atpase domain of g40p
Resolution2.35 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   563......570.........580.........590.........600.........610.........620.........630.........640..
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  DVAAELLDIYAQRAAKEGFAFKHDREQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAA
Query Conservation    
  

 


 
    
  
  
      
   
    
 

  

  
  
      




 



 





  

Alig confidence 



























.................














..

















Template Conservation     
 
               

 

  ................. 

  


   
 
 .. 
 
  
 


 
    
Template Sequence  SIDEALVTVYEEIESADGNITGVPSGFT. . . . . . . . . . . . . . . . . ELDRMTYGYKRRNFV. . LIAARPSMGKTAFALKQA
Template Known Secondary structure 

T
SSS

SB

S
.................SSB
TT
..

TTSS
Template Predicted Secondary structure 










.................





..





Template SS confidence 















































































   156...160.........170.........180... ......190........ .200.........210......
 
   643......650..... ....660.........
Predicted Secondary structure 


...

Query SS confidence 












. . .













Query Sequence  FLAVDNHKQVAVL. . . VPTTLLAQQHYDNF
Query Conservation    
   



 

...


  

 
    
Alig confidence 












...













Template Conservation        
  
   
 
        
     
Template Sequence  KNMSDNDDVVNLHSLEMGKKENIKRLIVTA
Template Known Secondary structure  TTT
SSS
Template Predicted Secondary structure 






Template SS confidence 





























   217..220.........230.........240......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions