Job Description P30958 Confidence 99.97% Date Thu Jan 5 11:46:49 GMT 2012 Rank 58 Aligned Residues 335 % Identity 17% Template c2w74B_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:type i restriction enzyme ecor124ii r protein; PDBTitle: mutant (k220r) of the hsdr subunit of the ecor124i2 restriction enzyme in complex with atp Resolution 2.74 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		601	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.									.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650			.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670
Predicted Secondary structure																				.	.	.	.	.	.	.	.																																	.	.
Query SS confidence																				.	.	.	.	.	.	.	.																																	.	.
Query Sequence		T	T	P	D	Q	A	Q	A	I	N	A	V	L	S	D	M	C	Q	.	.	.	.	.	.	.	.	P	L	A	M	D	R	L	V	C	G	D	V	G	F	G	K	T	E	V	A	M	R	A	A	F	L	A	V	D	N	H	K	.	.	Q	V	A	V	L	V	P	T	T	L	L	A	Q	Q	H	Y	D	N	F	R
Query Conservation																				.	.	.	.	.	.	.	.																																	.	.
Alig confidence																				.	.	.	.	.	.	.	.																																	.	.
Template Conservation
Template Sequence		M	R	P	Y	Q	I	A	A	T	E	R	I	L	W	K	I	K	S	S	F	T	A	K	N	W	S	K	P	E	S	G	G	Y	I	W	H	T	T	G	S	G	K	T	L	T	S	F	K	A	A	R	L	A	T	E	L	D	F	I	D	K	V	F	F	V	V	D	R	K	D	L	D	Y	Q	T	M	K	E	Y	Q
Template Known Secondary structure																							T	T			S	S	G	G	G	S							T	T	S	S													T	T		T	T										G	G	G
Template Predicted Secondary structure
Template SS confidence
		272	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.
		671	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.								.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.		.	740	.	.
Predicted Secondary structure																																																.	.	.	.	.	.	.																							.
Query SS confidence																																																.	.	.	.	.	.	.																							.
Query Sequence		D	R	F	A	N	W	P	V	R	I	E	M	I	S	R	F	R	S	A	K	E	Q	T	Q	I	L	A	E	V	A	E	G	K	I	D	I	L	I	G	T	H	K	L	L	Q	S	.	.	.	.	.	.	.	D	V	K	F	K	D	L	G	L	L	I	V	D	E	E	H	R	F	G	V	R	H	.	K	E	R	I
Query Conservation																																																.	.	.	.	.	.	.																							.
Alig confidence							.	.	.	.	.	.	.	.	.																																	.	.	.	.	.	.	.																							.
Template Conservation							.	.	.	.	.	.	.	.	.
Template Sequence		R	F	S	P	D	.	.	.	.	.	.	.	.	.	S	V	N	G	S	E	N	T	A	G	L	K	R	N	L	D	K	D	D	N	K	I	I	V	T	T	I	Q	K	L	N	N	L	M	K	A	E	S	D	L	P	V	Y	N	Q	Q	V	V	F	I	F	D	E	C	H	R	S	Q	F	G	E	A	Q	K	N	L
Template Known Secondary structure		T	T	S	T	T	.	.	.	.	.	.	.	.	.			S	S	S										T	T		T	T																			S			G	G	G	G	S								S
Template Predicted Secondary structure							.	.	.	.	.	.	.	.	.
Template SS confidence
		352	.	.	.	.										.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.
		743	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.																						.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		K	A	M	R	A	N	V	D	I	L	T	L	T	A	T	P	I	P	R	T	L	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	M	A	M	S	G	M	R	D	L	S	I	I	A	T	P	P	A	R	R	L	A	V	K	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Conservation																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																									.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		K	K	K	F	K	R	Y	Y	Q	F	G	F	T	G	T	P	I	F	P	E	N	A	L	G	S	E	T	T	A	S	V	F	G	R	E	L	H	S	Y	V	I	T	D	A	I	R	D	E	K	V	L	K	F	K	V	D	Y	N	D	V	R	P	Q	F	K	S	L	E	T	E	R	I	Q	E	I	T	Q	Y	I	L
Template Known Secondary structure						S									S	S				G	G	G		T	T	S									S													T	T	S	S												T	T	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		423	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.
																			788	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.										.	.	.	.	840	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	F	V	R	E	Y	D	S	M	V	V	R	E	A	I	L	R	E	I	L	R	G	G	Q	V	Y	Y	L	Y	N	D	V	E	N	I	Q	K	A	A	E	R	L	A	E	L	V	P	E	.	.	.	.	.	.	.	.	.	A	R	I	A	I	G
Query Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																																	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	N	F	R	Q	K	T	H	R	T	F	P	G	S	K	G	F	N	A	M	L	A	V	S	S	V	D	A	A	K	A	Y	Y	A	T	F	K	P	L	R	I	A	T	I	F	S	F	A	G	E	I	S	D	E	T	F	D	T	A	K	E	F	L	D	A	A	I	R	E	Y	N	S	H	F	K	T	N	F	S	T
Template Known Secondary structure									T			S	T	T											S	S																															S																			T					S
Template Predicted Secondary structure
Template SS confidence
		522	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.
		842	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.			.	.	910	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																				.	.
Query SS confidence																																																																				.	.
Query Sequence		H	G	Q	M	R	E	R	E	L	E	R	V	M	N	D	F	H	H	Q	R	F	N	V	L	V	C	T	T	I	I	E	T	G	I	D	I	P	T	A	N	T	I	I	I	E	R	A	D	H	F	G	L	A	Q	L	H	Q	L	R	G	R	V	G	R	S	H	.	.	H	Q	A	Y	A	W	L	L	T	P	H	P
Query Conservation																																																																				.	.
Alig confidence																																																	.	.																		.	.										.	.	.
Template Conservation																																																	.	.																													.	.	.
Template Sequence		D	S	N	G	F	Q	N	Y	Y	R	D	L	A	Q	R	V	K	N	Q	D	I	D	L	L	I	V	V	G	M	F	L	T	G	F	D	A	P	T	L	N	T	L	F	V	D	K	N	.	.	L	R	Y	H	G	L	M	Q	A	F	S	R	T	N	R	I	Y	D	A	T	K	T	F	G	N	I	V	T	.	.	.
Template Known Secondary structure		S																	T	T	S	S	S					S	S	T	T	S	S	S				T	T								S		.	.											G	G	G						T	T			S						.	.	.
Template Predicted Secondary structure																																																	.	.																													.	.	.
Template SS confidence
		630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.			.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
		920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	A	M	T	T	D	A	Q	K	R	L	E	A	I	A	S	L	E	D	L	G	A	G	F	A	L	A	T	H	D	L	E
Query Conservation
Alig confidence		.	.
Template Conservation		.	.
Template Sequence		.	.	F	R	D	L	E	R	S	T	I	D	A	I	T	L	F	G	D	K	N	T	K	N	V	V	L	E	K	S	Y	T
Template Known Secondary structure		.	.	S	S													T	S		T	T						B
Template Predicted Secondary structure		.	.
Template SS confidence
				705	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.

No model constructed - rank, confidence too low