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Job DescriptionP30958
Confidence99.90%DateThu Jan 5 11:46:49 GMT 2012
Rank69Aligned Residues304
% Identity19%Templatec2w00B_
PDB info PDB header:hydrolaseChain: B: PDB Molecule:hsdr; PDBTitle: crystal structure of the hsdr subunit of the ecor124i2 restriction enzyme in complex with atp
Resolution2.6 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  TTPDQAQAINAVLSDMCQPLAMDR. . . . . . . . LVCGDVGFGKTEVAMRAAFLAVDNH. . KQVAVLVPTTLLAQQHYDNFR
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Template Sequence  XRPYQIAATERILWKIKSSFTAKNWSKPESGGYIWHTTGSGKTLTSFKAARLATELDFIDKVFFVVDRKDLDYQTXKEYQ
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TT

SSGGGS
TTSSTT
TT


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   272.......280.........290.........300.........310.........320.........330.........340.........350.
 
   671........680.........690.........700.........710.... .....720.........730........ .740..
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Query Sequence  DRFANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLL. . . . . . . QSDVKFKDLGLLIVDEEHRFGVRH. KERI
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Template Sequence  RFSPDS. . . . . . . . . VNGSENTAGLKRNLDKDDNKIIVTTIQKLNNLXKAESDLPVYNQQVVFIFDECHRSQFGEAQKNL
Template Known Secondary structure  TTSTT
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   352..... ..360.........370.........380.........390.........400.........410.........420..
 
   743......750.........760 .........770.........780.........790...
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Query Sequence  KAMRANVDILTLTATPIP. . . . . . . RTLNMAMSGMRDLSIIATPPARRLAVKTFVREY. . . . . . . . . . . . . . . . . . . . . .
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Template Sequence  KKKFKRYYQFGFTGTPIFPENALGSETTASVFGRELHSYVITDAIRDEKVLKFKVDYNDVRPQFKSLETETDEKKLSAAE
Template Known Secondary structure 
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TTTT


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   423......430.........440.........450.........460.........470.........480.........490.........500..
 
   794.....800....... ..810.........820.........830... ......840....
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Query Sequence  . . . . . . DSMVVREAILREIL. . . . . . . . . . . . . RGGQVYYLYNDVENIQKAAERLAELV. . . . . . . . . . PEARIAIGHGQ
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Template Sequence  NQQAFLHPXRIQEITQYILNNFRQKTHRTFPGSKGFNAXLAVSSVDAAKAYYATFKRLQEEAANKSATYKPLRIATIFSF
Template Known Secondary structure  STTTTT
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   503......510.........520.........530.........540.........550.........560.........570.........580..
 
   845. ...850.........860.........870.........880
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Query Sequence  MR. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . ERELERVMNDFHHQRFNVLVCTTIIETGIDIPTA
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Template Sequence  AAIGEISDETFDTSAXDSSAKEFLDAAIREYNSHFKTNFSTDSNGFQNYYRDLAQRVKNQDIDLLIVVGXFLTGFDAPTL
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GGGS
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SSTTSSSSSTTSSS


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   583......590.........600.........610.........620.........630.........640.........650.........660..
 
   881........890.........900..... ....910.....
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Query Sequence  NTIIIERADHFGLAQLHQLRGRVGR. . SHHQAYAWLL
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Template Sequence  NTLFVDK. . NLRYHGLXQAFSRTNRIYDATKTFGNIV
Template Known Secondary structure  S..


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   669670..... ....680.........690.........700...
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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