Job Description P30958 Confidence 100.00% Date Thu Jan 5 11:46:49 GMT 2012 Rank 18 Aligned Residues 328 % Identity 17% Template c2va8A_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:ski2-type helicase; PDBTitle: dna repair helicase hel308 Resolution 2.30 Å

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		586	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.		.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.
Predicted Secondary structure																																																																	.
Query SS confidence																																																																	.
Query Sequence		D	R	E	Q	Y	Q	L	F	C	D	S	F	P	F	E	T	T	P	D	Q	A	Q	A	I	N	A	V	L	S	D	M	C	Q	P	L	A	M	D	R	L	V	C	G	D	V	G	F	G	K	T	E	V	A	M	R	A	A	F	L	A	V	D	N	.	H	K	Q	V	A	V	L	V	P	T	T	L	L	A	Q	Q
Query Conservation																																																																	.
Alig confidence																												.	.	.							.	.																											.
Template Conservation																												.	.	.							.	.
Template Sequence		P	S	N	V	I	E	I	I	K	K	R	G	I	K	K	L	N	P	P	Q	T	E	A	V	K	K	.	.	.	G	L	L	E	G	N	.	.	R	L	L	L	T	S	P	T	G	S	G	K	T	L	I	A	E	M	G	I	I	S	F	L	L	K	N	G	G	K	A	I	Y	V	T	P	L	R	A	L	T	N	E
Template Known Secondary structure											T	T	S			B											T	.	.	.	T	T	T	T	T		.	.								T	T	S																	S		S							S
Template Predicted Secondary structure																												.	.	.							.	.
Template SS confidence
		9	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.				.	.	.	.	.	40			.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		665	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.						.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																					.	.	.	.	.
Query SS confidence																																																					.	.	.	.	.
Query Sequence		H	Y	D	N	F	R	D	R	F	A	N	W	P	V	R	I	E	M	I	S	R	F	R	S	A	K	E	Q	T	Q	I	L	A	E	V	A	E	G	K	I	D	I	L	I	G	T	H	K	L	L	Q	.	.	.	.	.	S	D	V	K	F	K	D	L	G	L	L	I	V	D	E	E	H	R	F	G	V	R	H	K
Query Conservation																																																					.	.	.	.	.
Alig confidence									.																							.	.	.	.	.	.	.															.	.	.	.	.
Template Conservation									.																							.	.	.	.	.	.	.
Template Sequence		K	Y	L	T	F	K	D	.	W	E	L	I	G	F	K	V	A	M	T	S	G	D	Y	D	T	D	D	A	W	L	.	.	.	.	.	.	.	K	N	Y	D	I	I	I	T	T	Y	E	K	L	D	S	L	W	R	H	R	P	E	W	L	N	E	V	N	Y	F	V	L	D	E	L	H	Y	L	N	D	P	E	R
Template Known Secondary structure							G	G	.	G	G	G	G	T								S		S	S	S			G	G	G	.	.	.	.	.	.	.	G	G		S																		G	G	G	G	G								S	G	G	G	G	G		T	T	T
Template Predicted Secondary structure									.																							.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90		.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.								.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.
						740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.		.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.																.	790	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.																			.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence		.	.	.	.																			.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		.	.	.	.	E	R	I	K	A	M	R	A	N	V	D	I	L	T	L	T	A	T	.	P	I	P	R	T	L	N	M	A	M	S	G	M	R	D	L	S	I	I	A	T	P	P	A	R	R	L	A	V	K	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	R	E	Y	D	S	M	V	V	R
Query Conservation		.	.	.	.																			.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.																			.																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	P	V	V	E	S	V	T	I	R	A	K	R	R	N	L	L	A	L	S	A	T	I	S	N	Y	K	Q	I	A	K	W	L	G	A	E	P	V	A	T	N	W	R	P	V	P	L	I	E	G	V	I	Y	P	E	R	K	K	K	E	Y	N	V	I	F	K	D	N	T	T	K	K	V	H	G	D	D	A	I	I
Template Known Secondary structure														T	S							S			T	T									T										S	S											S	S	T	T							T	T	S							S	S	S
Template Predicted Secondary structure
Template SS confidence
		156	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.																																			.	.	840	.	.	.	.	.
Predicted Secondary structure																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		E	A	I	L	R	E	I	L	R	G	G	Q	V	Y	Y	L	Y	N	D	V	E	N	I	Q	K	A	A	E	R	L	A	E	L	V	P	E	A	R	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	A	I	G	H	G	Q	M
Query Conservation																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	Y	T	L	D	S	L	S	K	N	G	Q	V	L	V	F	R	N	S	R	K	M	A	E	S	T	A	L	K	I	A	N	Y	M	N	F	V	S	L	D	E	N	A	L	S	E	I	L	K	Q	L	D	D	I	E	E	G	G	S	D	E	K	E	L	L	K	S	L	I	S	K	G	V	A	Y	H	H	A	G	L
Template Known Secondary structure									T	T	T								S	S														T	T	T	S	S																T			S	S													T	T	T						T	T	S
Template Predicted Secondary structure
Template SS confidence
		236	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.
		846	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.			.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.
Predicted Secondary structure																																																																.	.
Query SS confidence																																																																.	.
Query Sequence		R	E	R	E	L	E	R	V	M	N	D	F	H	H	Q	R	F	N	V	L	V	C	T	T	I	I	E	T	G	I	D	I	P	T	A	N	T	I	I	I	E	R	A	D	H	F	G	L	A	Q	L	H	Q	L	R	G	R	V	G	R	S	H	.	.	H	Q	A	Y	A	W	L	L	T	P	H	P	K	A	M	T
Query Conservation																																																																.	.
Alig confidence																																											.	.	.	.																		.	.
Template Conservation																																											.	.	.	.
Template Sequence		S	K	A	L	R	D	L	I	E	E	G	F	R	Q	R	K	I	K	V	I	V	A	T	P	T	L	A	A	G	V	N	L	P	A	R	T	V	I	I	G	D	.	.	.	.	I	P	I	M	E	Y	K	Q	M	S	G	R	A	G	R	P	G	F	D	Q	I	G	E	S	I	V	V	V	R	D	K	E	D	V	D
Template Known Secondary structure															T	T		S							G	G	G	G	G	S	S				B	S							.	.	.	.											T	T	B			T	T	T		S									S		G	G	G
Template Predicted Secondary structure																																											.	.	.	.
Template SS confidence
		316	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.					.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.
		924	.	.	.	.	.	930
Predicted Secondary structure
Query SS confidence
Query Sequence		T	D	A	Q	K	R	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	V	F	K	K	Y	V
Template Known Secondary structure							T	T
Template Predicted Secondary structure
Template SS confidence
		406	.	.	.	410	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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