 |
Job Description | P30958 | Confidence | 92.82% | Date | Thu Jan 5 11:46:49 GMT 2012 |
Rank | 292 | Aligned Residues | 53 |
% Identity | 19% | Template | c2r65A_ |
PDB info |
PDB header:hydrolase | Chain: A: PDB Molecule:cell division protease ftsh homolog; |
PDBTitle: crystal structure of helicobacter pylori atp dependent protease, ftsh2 adp complex
|
Resolution | 3.30 Å |
|
 |
  |   |
603 | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
. | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
P | D | Q | A | Q | A | I | N | A | V | L | S | D | M | C | . |
. |
. |
. |
. |
. |
. |
. |
. |
Q | P | L | A | M | D | R | L | V | C | G | D | V | G | F | G | K | T | E | V | A | M | R | A | A | F | L | A | V | D | N | H | K | Q | V | A | V | L | V | P | T |
Query Conservation |   |
  |
|
|   |   |
|
|   |   |
|   |   |
|   |   | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|
|
|   |
|
|
|
|   |
|
|
|
|
|
|   |   |
|
|   |   |
|   |   |   |
|
|
|
|   |
|
|
|
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|
|
|
|   |
|
|   |
|
|
|   |   |   | . | . | . |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
E | E | A | K | E | E | V | V | E | I | V | D | F | L | K | Y | P | E | R | Y | A | N | L | G | A | K | I | P | K | G | V | L | L | V | G | P | P | G | T | G | K | T | L | L | A | K | A | V | A | G | E | A | . |
. |
. |
H | V | P | F | F | S | M | G | G | S |
Template Known Secondary structure |   |
 |  |  |  |  | T | T |  |  |  |  |  |  |  |  | S |
|  |  |  |  | T | T | T |
|
|
|
| S |
|  |  |  |  |
| S | S | S | S | S |  |  |  |  |  |  |  |  |  |  |  |  | . | . | . | T |
|
|  |  |  |  |
| T | G |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  | . | . | . |  |  |
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
176 | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | |
|
|
. | . | 230 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|