Job Description P30958 Confidence 99.76% Date Thu Jan 5 11:46:49 GMT 2012 Rank 100 Aligned Residues 146 % Identity 16% Template c2p6nA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:atp-dependent rna helicase ddx41; PDBTitle: human dead-box rna helicase ddx41, helicase domain Resolution 2.60 Å

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		786	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.		.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.
Predicted Secondary structure																							.
Query SS confidence																							.
Query Sequence		V	K	T	F	V	R	E	Y	D	S	M	V	V	R	E	A	I	L	R	E	I	.	L	R	G	G	Q	V	Y	Y	L	Y	N	D	V	E	N	I	Q	K	A	A	E	R	L	A	E	L	V	P	E	A	R	I	A	I	G	H	G	Q	M	R	E	R	E	L	E	R	V	M	N	D	F	H	H	Q	R	F	N	V
Query Conservation																							.
Alig confidence																							.																											.	.
Template Conservation																																																		.	.
Template Sequence		V	I	Q	E	V	E	Y	V	K	E	E	A	K	M	V	Y	L	L	E	C	L	Q	K	T	P	P	P	V	L	I	F	A	E	K	K	A	D	V	D	A	I	H	E	Y	L	L	L	K	.	.	G	V	E	A	V	A	I	H	G	G	K	D	Q	E	E	R	T	K	A	I	E	A	F	R	E	G	K	K	D	V
Template Known Secondary structure		S									G	G	G										T	T	S		S							S																.	.	T								T	T	S															T	S		S
Template Predicted Secondary structure																																																		.	.
Template SS confidence
		408	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.			.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.
		865	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	C	T	T	I	I	E	T	G	I	D	I	P	T	A	N	T	I	I	I	E	R	A	D	H	F	G	L	A	Q	L	H	Q	L	R	G	R	V	G	R	S	H	H	Q	A	Y	A	W	L	L	T	P	H	P	K	A	M	T	T	D	A	Q	K	R	L	E	A	I	A	S
Query Conservation
Alig confidence																												.																		.
Template Conservation																												.																		.
Template Sequence		L	V	A	T	D	V	A	S	K	G	L	D	F	P	A	I	Q	H	V	I	N	Y	D	M	P	E	.	E	I	E	N	Y	V	H	R	I	G	R	T	G	C	T	G	I	.	A	T	T	F	I	N	K	A	C	D	E	S	V	L	M	D	L	K	A	L	L	L	E	A	K	Q
Template Known Secondary structure										T	T							S					S	S			S	.	S									T	T	S						.							T	T	S															T	T
Template Predicted Secondary structure																												.																		.
Template SS confidence
		486	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.		.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.		.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions