Return to main results Retrieve Phyre Job Id

Job DescriptionP30958
Confidence100.00%DateThu Jan 5 11:46:49 GMT 2012
Rank26Aligned Residues306
% Identity14%Templatec2ocaA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:atp-dependent dna helicase uvsw; PDBTitle: the crystal structure of t4 uvsw
Resolution2.70 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   595....600.........610.........620.........630.........640....... ..650.........660.........670...
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Query Sequence  DSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVD. NHKQVAVLVPTTLLAQQHYDNFRDRF
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Template Sequence  GNKRIEPHWYQKDAVFEGLVN. . . . . . RRRILNLPTSAGRSLIQALLARYYLENYEGKILIIVPTTALTTQMADDFVDYR
Template Known Secondary structure  TT


......S

STTT
SSSSTT
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   108.110.........120........ .130.........140.........150.........160.........170.........180.
 
   674.....680.........690.........700.........710......... 720.........730....... ..740.........750
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Query Sequence  ANWPVRIEMISRFRSAKEQTQILAEVAEGKIDILIGTHKLLQSDVK. . FKDLGLLIVDEEHRFGVR. HKERIKAMRANVD
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Template Sequence  LFSHAMIKKIGGGASKDDKYKND. . . . . . . APVVVGTWQTVVKQPKEWFSQFGMMMNDECHLATGKSISSIISGLNNCMF
Template Known Secondary structure  SS
GGG
GGG

TTGGG
TT.......
STTS
GGGGGGTGGG

GGG
TT

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   182.......190.........200.... .....210.........220.........230.........240.........250....
 
   751........760.........770.........780.........790...... ...800.....
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Query Sequence  ILTLTATPIPRTLNMAMSGMRDLSIIATPPARRLAVKTFVREYDSM. . . . . . . . . . . . . . . . . . . . . . . . . VVREAILRE
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Template Sequence  KFGLSGSLRDGKANIMQYVGMFGEIFKPVTTSELKINSIFLRYPDEFTTKLKGKTYQEEIKIITGLSKRNKWIAKLAIKL
Template Known Secondary structure  S
GGG
SS

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TT

T
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   255....260.........270.........280.........290.........300.........310.........320.........330....
 
   806...810.........820.........830.........840.........850.........860... ......870.........880....
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Query Sequence  ILRGGQVYYLYNDVENIQKAAERLAELVPEARIAIGHGQMRERELERVMNDFHHQRFN. VLVCTTIIETGIDIPTANTII
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Template Sequence  AQKDENAFVMFKHVSHGKAIFDLIKNE. . YDKVYYVSGEVDTETRNIMKTLAENGKGIIIVASYGVFSTGISVKNLHHVV
Template Known Secondary structure  TTT
SSTT..
SSSSSTT

S
S



S
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   344.....350.........360.........370 .........380.........390.........400.........410.........420.
 
   885....890.........900.........910......
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Query Sequence  IERADHFGLAQLHQLRGRVGRSHHQAYAWLLT
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Template Sequence  LAHGVK. SKIIVLQTIGRVLRKHGSKTIATVW
Template Known Secondary structure  SS


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TTT





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   422..... ..430.........440.........450..
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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