Return to main results Retrieve Phyre Job Id

Job DescriptionP30958
Confidence72.52%DateThu Jan 5 11:46:49 GMT 2012
Rank489Aligned Residues79
% Identity16%Templatec2oblA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:escn; PDBTitle: structural and biochemical analysis of a prototypical atpase from the2 type iii secretion system of pathogenic bacteria
Resolution1.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   625....630.........640.........650...... ...660.........670.
Predicted Secondary structure 








.................................

Query SS confidence 































. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .














Query Sequence  LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLV. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . PTTLLAQQHYDNFRD
Query Conservation 

 



 





  

  
   



 


.................................

  

 
    
  
Alig confidence 












.

















.................................














Template Conservation   
 
  
 


 
.
  
         
   



  

 
    
       



  

      
  
   
  


Template Sequence  GIFAGSGVGKSTL. LGMICNGASADIIVLALIGERGREVNEFLALLPQSTLSKCVLVVTTSDRPALERMKAAFTATTIAE
Template Known Secondary structure 
TTSS.S

SS

TTS
TT
TTS
Template Predicted Secondary structure 





.


















Template SS confidence 















































































   174.....180...... ...190.........200.........210.........220.........230.........240.........250..
 
   672.......680.........690.........700....
Predicted Secondary structure 













Query SS confidence 
































Query Sequence  RFANWPVRIEMISRFRSAKEQTQILAEVAEGKI
Query Conservation 

    
 
  

      
          
  
Alig confidence 
































Template Conservation 
    
  


  




 
 
 



   

 
Template Sequence  YFRDQGKNVLLMMDSVTRYARAARDVGLASGEP
Template Known Secondary structure  TTT
TTT

Template Predicted Secondary structure 










Template SS confidence 
































   253......260.........270.........280.....
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions