Job Description P30958 Confidence 99.78% Date Thu Jan 5 11:46:49 GMT 2012 Rank 96 Aligned Residues 142 % Identity 18% Template c2hjvB_ PDB info PDB header:hydrolase Chain: B: PDB Molecule:atp-dependent rna helicase dbpa; PDBTitle: structure of the second domain (residues 207-368) of the2 bacillus subtilis yxin protein Resolution 1.95 Å

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		786	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.			.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.
Predicted Secondary structure																							.	.
Query SS confidence																							.	.
Query Sequence		V	K	T	F	V	R	E	Y	D	S	M	V	V	R	E	A	I	L	R	E	I	.	.	L	R	G	G	Q	V	Y	Y	L	Y	N	D	V	E	N	I	Q	K	A	A	E	R	L	A	E	L	V	P	E	A	R	I	A	I	G	H	G	Q	M	R	E	R	E	L	E	R	V	M	N	D	F	H	H	Q	R	F	N
Query Conservation																							.	.
Alig confidence																							.	.																											.	.
Template Conservation																																																			.	.
Template Sequence		I	E	H	A	V	I	Q	V	R	E	E	N	K	F	S	L	L	K	D	V	L	M	T	E	N	P	D	S	C	I	I	F	C	R	T	K	E	H	V	N	Q	L	T	D	E	L	D	D	L	.	.	G	Y	P	C	D	K	I	H	G	G	M	I	Q	E	D	R	F	D	V	M	N	E	F	K	R	G	E	Y	R
Template Known Secondary structure											G	G	G															S	S						S	S														T	.	.	T								T	T	S															T	S		S
Template Predicted Secondary structure																																																			.	.
Template SS confidence
		215	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.			.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.
		864	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	L	V	C	T	T	I	I	E	T	G	I	D	I	P	T	A	N	T	I	I	I	E	R	A	D	H	F	G	L	A	Q	L	H	Q	L	R	G	R	V	G	R	S	H	H	Q	A	Y	A	W	L	L	T	P	H	P	K	A	M	T	T	D	A	Q	K	R	L	E	A	I	A	S	L
Query Conservation
Alig confidence																													.																															.	.	.	.	.	.
Template Conservation																													.																															.	.	.	.	.	.
Template Sequence		Y	L	V	A	T	D	V	A	A	R	G	I	D	I	E	N	I	S	L	V	I	N	Y	D	L	P	L	.	E	K	E	S	Y	V	H	R	T	G	R	T	G	R	A	G	N	K	G	K	A	I	S	F	V	T	A	F	E	K	.	.	.	.	.	.	R	F	L	A	D	I	E	E	Y
Template Known Secondary structure							T	T	T	T	T	T	S					B	S					S	S			S	.	S									T	T	B		B	T	T	B										T	T			.	.	.	.	.	.
Template Predicted Secondary structure																													.																															.	.	.	.	.	.
Template SS confidence
		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.							350	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions