Job Description P30958 Confidence 100.00% Date Thu Jan 5 11:46:49 GMT 2012 Rank 1 Aligned Residues 1146 % Identity 100% Template c2eyqA_ PDB info PDB header:hydrolase Chain: A: PDB Molecule:transcription-repair coupling factor; PDBTitle: crystal structure of escherichia coli transcription-repair2 coupling factor Resolution 3.20 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	Q	Y	R	Y	T	L	P	V	K	A	G	E	Q	R	L	L	G	E	L	T	G	A	A	C	A	T	L	V	A	E	I	A	E	R	H	A	G	P	V	V	L	I	A	P	D	M	Q	N	A	L	R	L	H	D	E	I	S	Q	F	T	D	Q	M	V	M	N	L	A	D	W	E	T	L	P	Y	D	S	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	E	Q	Y	R	Y	T	L	P	V	K	A	G	E	Q	R	L	L	G	E	L	T	G	A	A	C	A	T	L	V	A	E	I	A	E	R	H	A	G	P	V	V	L	I	A	P	D	M	Q	N	A	L	R	L	H	D	E	I	S	Q	F	T	D	Q	M	V	M	N	L	A	D	W	E	T	L	P	Y	D	S	F
Template Known Secondary structure				S		S						S	T	T		B			B					T	T												S	S	S	S							S	S												G	G	G		S	S										S		T	T		S	S
Template Predicted Secondary structure
Template SS confidence
		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	P	H	Q	D	I	I	S	S	R	L	S	T	L	Y	Q	L	P	T	M	Q	R	G	V	L	I	V	P	V	N	T	L	M	Q	R	V	C	P	H	S	F	L	H	G	H	A	L	V	M	K	K	G	Q	R	L	S	R	D	A	L	R	T	Q	L	D	S	A	G	Y	R	H	V	D	Q	V	M	E	H	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	P	H	Q	D	I	I	S	S	R	L	S	T	L	Y	Q	L	P	T	M	Q	R	G	V	L	I	V	P	V	N	T	L	M	Q	R	V	C	P	H	S	F	L	H	G	H	A	L	V	M	K	K	G	Q	R	L	S	R	D	A	L	R	T	Q	L	D	S	A	G	Y	R	H	V	D	Q	V	M	E	H	G	E
Template Known Secondary structure																		G	G	G			S											T	B	B										S						T	T		S														T					S	S			S	T	T
Template Predicted Secondary structure
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	A	T	R	G	A	L	L	D	L	F	P	M	G	S	E	L	P	Y	R	L	D	F	F	D	D	E	I	D	S	L	R	V	F	D	V	D	S	Q	R	T	L	E	E	V	E	A	I	N	L	L	P	A	H	E	F	P	T	D	K	A	A	I	E	L	F	R	S	Q	W	R	D	T	F	E	V	K	R	D	P
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	A	T	R	G	A	L	L	D	L	F	P	M	G	S	E	L	P	Y	R	L	D	F	F	D	D	E	I	D	S	L	R	V	F	D	V	D	S	Q	R	T	L	E	E	V	E	A	I	N	L	L	P	A	H	E	F	P	T	D	K	A	A	I	E	L	F	R	S	Q	W	R	D	T	F	E	V	K	R	D	P
Template Known Secondary structure						T	T							T	T		S	S								T	T										T	T	T		S						S							S	S	S	S			S															S					S	T
Template Predicted Secondary structure
Template SS confidence
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	H	I	Y	Q	Q	V	S	K	G	T	L	P	A	G	I	E	Y	W	Q	P	L	F	F	S	E	P	L	P	P	L	F	S	Y	F	P	A	N	T	L	L	V	N	T	G	D	L	E	T	S	A	E	R	F	Q	A	D	T	L	A	R	F	E	N	R	G	V	D	P	M	R	P	L	L	P	P	Q	S	L	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	H	I	Y	Q	Q	V	S	K	G	T	L	P	A	G	I	E	Y	W	Q	P	L	F	F	S	E	P	L	P	P	L	F	S	Y	F	P	A	N	T	L	L	V	N	T	G	D	L	E	T	S	A	E	R	F	Q	A	D	T	L	A	R	F	E	N	R	G	V	D	P	M	R	P	L	L	P	P	Q	S	L	W
Template Known Secondary structure		T	S							T	T				T	T	G	G	G	G	G	G	G	G		S	S				B	G	G	G	G	S		T	T							S																				S	T	T		T	T	S									B
Template Predicted Secondary structure
Template SS confidence
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	V	D	E	L	F	S	E	L	K	N	W	P	R	V	Q	L	K	T	E	H	L	P	T	K	A	A	N	A	N	L	G	F	Q	K	L	P	D	L	A	V	Q	A	Q	Q	K	A	P	L	D	A	L	R	K	F	L	E	T	F	D	G	P	V	V	F	S	V	E	S	E	G	R	R	E	A	L	G	E	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	R	V	D	E	L	F	S	E	L	K	N	W	P	R	V	Q	L	K	T	E	H	L	P	T	K	A	A	N	A	N	L	G	F	Q	K	L	P	D	L	A	V	Q	A	Q	Q	K	A	P	L	D	A	L	R	K	F	L	E	T	F	D	G	P	V	V	F	S	V	E	S	E	G	R	R	E	A	L	G	E	L
Template Known Secondary structure												T	T	S							S	S						T	T																S	S	S	S	S	T	T								T	T			S							S	S
Template Predicted Secondary structure
Template SS confidence
		322	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	R	I	K	I	A	P	Q	R	I	M	R	L	D	E	A	S	D	R	G	R	Y	L	M	I	G	A	A	E	H	G	F	V	D	T	V	R	N	L	A	L	I	C	E	S	D	L	L	G	E	R	V	A	R	R	R	Q	D	S	R	R	T	I	N	P	D	T	L	I	R	N	L	A	E	L	H	I	G	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		L	A	R	I	K	I	A	P	Q	R	I	M	R	L	D	E	A	S	D	R	G	R	Y	L	M	I	G	A	A	E	H	G	F	V	D	T	V	R	N	L	A	L	I	C	E	S	D	L	L	G	E	R	V	A	R	R	R	Q	D	S	R	R	T	I	N	P	D	T	L	I	R	N	L	A	E	L	H	I	G	Q
Template Known Secondary structure			G	G	G	T							S	S	G	G	G			T	T											S					T	T	T	T										S	S										G	G	G	B									T		T	T			T	T
Template Predicted Secondary structure
Template SS confidence
		402	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	V	V	H	L	E	H	G	V	G	R	Y	A	G	M	T	T	L	E	A	G	G	I	T	G	E	Y	L	M	L	T	Y	A	N	D	A	K	L	Y	V	P	V	S	S	L	H	L	I	S	R	Y	A	G	G	A	E	E	N	A	P	L	H	K	L	G	G	D	A	W	S	R	A	R	Q	K	A	A	E	K	V
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	V	V	H	L	E	H	G	V	G	R	Y	A	G	M	T	T	L	E	A	G	G	I	T	G	E	Y	L	M	L	T	Y	A	N	D	A	K	L	Y	V	P	V	S	S	L	H	L	I	S	R	Y	A	G	G	A	E	E	N	A	P	L	H	K	L	G	G	D	A	W	S	R	A	R	Q	K	A	A	E	K	V
Template Known Secondary structure						T	T	T													S	S	S											G	G	G							G	G	G	G	G	G							S		S	S	S						T	T		S
Template Predicted Secondary structure
Template SS confidence
		482	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560	.
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	D	V	A	A	E	L	L	D	I	Y	A	Q	R	A	A	K	E	G	F	A	F	K	H	D	R	E	Q	Y	Q	L	F	C	D	S	F	P	F	E	T	T	P	D	Q	A	Q	A	I	N	A	V	L	S	D	M	C	Q	P	L	A	M	D	R	L	V	C	G	D	V	G	F	G	K	T	E	V	A	M	R	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		R	D	V	A	A	E	L	L	D	I	Y	A	Q	R	A	A	K	E	G	F	A	F	K	H	D	R	E	Q	Y	Q	L	F	C	D	S	F	P	F	E	T	T	P	D	Q	A	Q	A	I	N	A	V	L	S	D	M	C	Q	P	L	A	M	D	R	L	V	C	G	D	V	G	F	G	K	T	E	V	A	M	R	A
Template Known Secondary structure																	T	S																		T			S																			S	S	S												T	T	T
Template Predicted Secondary structure
Template SS confidence
		562	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	F	L	A	V	D	N	H	K	Q	V	A	V	L	V	P	T	T	L	L	A	Q	Q	H	Y	D	N	F	R	D	R	F	A	N	W	P	V	R	I	E	M	I	S	R	F	R	S	A	K	E	Q	T	Q	I	L	A	E	V	A	E	G	K	I	D	I	L	I	G	T	H	K	L	L	Q	S	D	V	K	F	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	F	L	A	V	D	N	H	K	Q	V	A	V	L	V	P	T	T	L	L	A	Q	Q	H	Y	D	N	F	R	D	R	F	A	N	W	P	V	R	I	E	M	I	S	R	F	R	S	A	K	E	Q	T	Q	I	L	A	E	V	A	E	G	K	I	D	I	L	I	G	T	H	K	L	L	Q	S	D	V	K	F	K
Template Known Secondary structure							T	T	T								S	S															S	T	T	T	T							S	T	T	S														T	T			S						T					S					S
Template Predicted Secondary structure
Template SS confidence
		642	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.
		722	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	L	G	L	L	I	V	D	E	E	H	R	F	G	V	R	H	K	E	R	I	K	A	M	R	A	N	V	D	I	L	T	L	T	A	T	P	I	P	R	T	L	N	M	A	M	S	G	M	R	D	L	S	I	I	A	T	P	P	A	R	R	L	A	V	K	T	F	V	R	E	Y	D	S	M	V	V	R	E	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	L	G	L	L	I	V	D	E	E	H	R	F	G	V	R	H	K	E	R	I	K	A	M	R	A	N	V	D	I	L	T	L	T	A	T	P	I	P	R	T	L	N	M	A	M	S	G	M	R	D	L	S	I	I	A	T	P	P	A	R	R	L	A	V	K	T	F	V	R	E	Y	D	S	M	V	V	R	E	A
Template Known Secondary structure		S								S	G	G	G	S													T	T	S							S	S											T	T	T	S											B		B
Template Predicted Secondary structure
Template SS confidence
		722	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.
		802	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	R	E	I	L	R	G	G	Q	V	Y	Y	L	Y	N	D	V	E	N	I	Q	K	A	A	E	R	L	A	E	L	V	P	E	A	R	I	A	I	G	H	G	Q	M	R	E	R	E	L	E	R	V	M	N	D	F	H	H	Q	R	F	N	V	L	V	C	T	T	I	I	E	T	G	I	D	I	P	T	A	N
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	L	R	E	I	L	R	G	G	Q	V	Y	Y	L	Y	N	D	V	E	N	I	Q	K	A	A	E	R	L	A	E	L	V	P	E	A	R	I	A	I	G	H	G	Q	M	R	E	R	E	L	E	R	V	M	N	D	F	H	H	Q	R	F	N	V	L	V	C	T	T	I	I	E	T	G	I	D	I	P	T	A	N
Template Known Secondary structure							T	T	T										S	S														T	T	S							S	S															T	T	S							S	S	T	T	G	G	G	S			T	T
Template Predicted Secondary structure
Template SS confidence
		802	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.
		882	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	I	I	I	E	R	A	D	H	F	G	L	A	Q	L	H	Q	L	R	G	R	V	G	R	S	H	H	Q	A	Y	A	W	L	L	T	P	H	P	K	A	M	T	T	D	A	Q	K	R	L	E	A	I	A	S	L	E	D	L	G	A	G	F	A	L	A	T	H	D	L	E	I	R	G	A	G	E	L	L	G	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	I	I	I	E	R	A	D	H	F	G	L	A	Q	L	H	Q	L	R	G	R	V	G	R	S	H	H	Q	A	Y	A	W	L	L	T	P	H	P	K	A	M	T	T	D	A	Q	K	R	L	E	A	I	A	S	L	E	D	L	G	A	G	F	A	L	A	T	H	D	L	E	I	R	G	A	G	E	L	L	G	E
Template Known Secondary structure						T	T	T	T	S	S										T	T			B	T	T	B											G	G	G	S												T	T			S	B	S
Template Predicted Secondary structure
Template SS confidence
		882	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.
		962	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	S	G	S	M	E	T	I	G	F	S	L	Y	M	E	L	L	E	N	A	V	D	A	L	K	A	G	R	E	P	S	L	E	D	L	T	S	Q	Q	T	E	V	E	L	R	M	P	S	L	L	P	D	D	F	I	P	D	V	N	T	R	L	S	F	Y	K	R	I	A	S	A	K	T	E	N	E	L	E	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	Q	S	G	S	M	E	T	I	G	F	S	L	Y	M	E	L	L	E	N	A	V	D	A	L	K	A	G	R	E	P	S	L	E	D	L	T	S	Q	Q	T	E	V	E	L	R	M	P	S	L	L	P	D	D	F	I	P	D	V	N	T	R	L	S	F	Y	K	R	I	A	S	A	K	T	E	N	E	L	E	E
Template Known Secondary structure																													T			S			G	G	G	S									S	S			S			T	T	T	S																		S
Template Predicted Secondary structure
Template SS confidence
		962	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.
		1042	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	K	V	E	L	I	D	R	F	G	L	L	P	D	P	A	R	T	L	L	D	I	A	R	L	R	Q	Q	A	Q	K	L	G	I	R	K	L	E	G	N	E	K	G	G	V	I	E	F	A	E	K	N	H	V	N	P	A	W	L	I	G	L	L	Q	K	Q	P	Q	H	Y	R	L	D	G	P	T	R	L	K	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	K	V	E	L	I	D	R	F	G	L	L	P	D	P	A	R	T	L	L	D	I	A	R	L	R	Q	Q	A	Q	K	L	G	I	R	K	L	E	G	N	E	K	G	G	V	I	E	F	A	E	K	N	H	V	N	P	A	W	L	I	G	L	L	Q	K	Q	P	Q	H	Y	R	L	D	G	P	T	R	L	K	F
Template Known Secondary structure												S																								S						S	S								S	S																G	G	G					T	T	T
Template Predicted Secondary structure
Template SS confidence
		1042	.	.	.	.	.	.	.	1050	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120	.
		1122	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	Q	D	L	S	E	R	K	T	R	I	E	W	V	R	Q	F	M	R	E	L	E	E	N	A	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	Q	D	L	S	E	R	K	T	R	I	E	W	V	R	Q	F	M	R	E	L	E	E	N	A	I
Template Known Secondary structure							S																	T	T
Template Predicted Secondary structure
Template SS confidence
		1122	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.