Return to main results Retrieve Phyre Job Id

Job DescriptionP30958
Confidence89.51%DateThu Jan 5 11:46:49 GMT 2012
Rank327Aligned Residues47
% Identity21%Templatec2cvhB_
PDB info PDB header:dna binding proteinChain: B: PDB Molecule:dna repair and recombination protein radb; PDBTitle: crystal structure of the radb recombinase
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   625....630.........640.........650.........660.........670....
Predicted Secondary structure 












Query SS confidence 

















































Query Sequence  LVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNFRDRFA
Query Conservation 

 



 





  

  
   



 




  

 
    
  

 
Alig confidence 




















...

























Template Conservation   
 
  
 


 
 
  
   ...                          
Template Sequence  QVYGPYASGKTTLALQTGLLS. . . GKKVAYVDTEGGFSPERLVQMAETRG
Template Known Secondary structure 
STTSS...
SSSS


TT
Template Predicted Secondary structure 





...











Template SS confidence 

















































   24.....30.........40.... .....50.........60.........70
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions