Job Description P30958 Confidence 98.10% Date Thu Jan 5 11:46:49 GMT 2012 Rank 162 Aligned Residues 181 % Identity 18% Template c2cnwF_ PDB info PDB header:signal recognition Chain: F: PDB Molecule:cell division protein ftsy; PDBTitle: gdpalf4 complex of the srp gtpases ffh and ftsy Resolution 2.39 Å

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		566	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	E	L	L	D	I	Y	A	Q	R	A	A	K	E	G	F	A	F	K	H	D	R	E	Q	Y	Q	L	F	C	D	S	F	P	F	E	T	T	P	D	Q	A	Q	A	I	N	A	V	L	S	D	M	C	Q	P	L	A	M	D	R	L	V	C	G	D	V	G	F	G	K	T	E	V	A	M	R	A	A	F	L	A
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	E	V	L	E	E	L	E	M	A	L	L	A	A	D	V	G	L	S	A	T	E	E	I	L	Q	E	V	R	A	S	G	R	K	D	L	K	E	A	V	K	E	K	L	V	G	M	L	E	P	P	V	E	P	K	G	R	V	V	L	V	V	G	V	N	G	V	G	K	T	T	T	I	A	K	L	G	R	Y	Y
Template Known Secondary structure		T												T	T	T																			S		S												T							S	S	S							S	T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		29	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.
		646	.	.	.	650	.	.	.	.	.	.			.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.
Predicted Secondary structure													.	.
Query SS confidence													.	.
Query Sequence		V	D	N	H	K	Q	V	A	V	L	V	.	.	P	T	T	L	L	A	Q	Q	H	Y	D	N	F	R	D	R	F	A	N	W	P	V	R	I	E	M	I	S	R	F	R	S	A	K	E	Q	T	Q	I	L	A	E	V	A	E	G	K	I	D	I	L	I	G	T	H	K	L	L	Q	S	D	V	K	F	K	D	L
Query Conservation													.	.
Alig confidence													.	.																			.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Q	N	L	G	K	K	V	M	F	C	A	G	D	T	F	R	A	A	G	G	T	Q	L	S	E	W	G	K	R	L	S	.	.	.	.	.	I	P	V	I	Q	G	P	E	G	T	D	P	A	A	L	A	Y	D	A	V	Q	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	M	K	A	R	G	Y
Template Known Secondary structure			T	T	T											S	S	T	T													T	.	.	.	.	.								T	T	S													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.				T	T
Template Predicted Secondary structure																																	.	.	.	.	.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		127	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.						.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.																	180	.	.	.	.	.
		724	.	.	.	.	.	730	.	.	.			.	.	.	.	.	.	740	.	.	.	.	.											.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.
Predicted Secondary structure												.	.													.	.	.	.	.	.	.	.	.	.
Query SS confidence												.	.													.	.	.	.	.	.	.	.	.	.
Query Sequence		G	L	L	I	V	D	E	E	H	R	.	.	F	G	V	R	H	K	E	R	I	K	A	M	.	.	.	.	.	.	.	.	.	.	R	A	N	V	D	I	L	T	L	T	A	T	P	I	P	R	T	L	N	M	A	M
Query Conservation												.	.													.	.	.	.	.	.	.	.	.	.
Alig confidence												.	.													.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	L	L	F	V	D	T	A	G	R	L	H	T	K	H	N	L	M	E	E	L	K	K	V	K	R	A	I	A	K	A	D	P	E	E	P	K	E	V	W	L	V	L	D	A	V	T	G	Q	N	G	L	E	Q	A	K
Template Known Secondary structure		S											T	T																				T	T											T	T			T
Template Predicted Secondary structure
Template SS confidence
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions