Return to main results Retrieve Phyre Job Id

Job DescriptionP30958
Confidence94.01%DateThu Jan 5 11:46:49 GMT 2012
Rank274Aligned Residues61
% Identity15%Templatec2c99A_
PDB info PDB header:transcription regulationChain: A: PDB Molecule:psp operon transcriptional activator; PDBTitle: structural basis of the nucleotide driven conformational2 changes in the aaa domain of transcription activator pspf
Resolution1.9 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   606...610.........620.........630.........640.........650.........660.........
Predicted Secondary structure 

















Query SS confidence 































































Query Sequence  AQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHKQVAVLVPTTLLAQQHYDNF
Query Conservation    

  
  
      




 



 





  

  
   



 




  

 
    
Alig confidence 
















..













.





























Template Conservation        
         
..

 







 

.  

            
             
Template Sequence  LEVLEQVSHLAPLDKPV. . LIIGERGTGKELIA. SRLHYLSSRWQGPFISLNCAALNENLLDSE
Template Known Secondary structure  TTS
S
..

TTSS.TSTTTTS
GGGS
Template Predicted Secondary structure 





..





.










Template SS confidence 































































   16...20.........30.. .......40...... ...50.........60.........70......
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions