Job Description P30958 Confidence 96.54% Date Thu Jan 5 11:46:49 GMT 2012 Rank 199 Aligned Residues 104 % Identity 17% Template c2b8tA_ PDB info PDB header:transferase Chain: A: PDB Molecule:thymidine kinase; PDBTitle: crystal structure of thymidine kinase from u.urealyticum in2 complex with thymidine Resolution 2.00 Å

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		625	.	.	.	.	630	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	V	C	G	D	V	G	F	G	K	T	E	V	A	M	R	A	A	F	L	A	V	D	N	H	K	Q	V	A	V	L	V	P	T	T	L	L	A	Q	Q	H	Y	D	N	F	R	D	R	F	A	N	W	P	V	R	I	E	M	I	S	R	F	R	S	A	K	E	Q	T	Q	I	L	A	E	V	A	E	G	K	I
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.						.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.						.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		F	I	T	G	P	M	F	A	G	K	T	A	E	L	I	R	R	L	H	R	L	E	Y	A	D	V	K	Y	L	V	F	K	P	K	I	D	.	.	.	.	.	.	.	.	.	.	T	R	S	I	R	.	.	.	N	I	Q	S	R	T	G	T	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	P
Template Known Secondary structure						S	T	T	S																T	T												.	.	.	.	.	.	.	.	.	.	G	G	G		S	.	.	.	S								S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.						.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.											.	.	.	.	.				.	.	.	60	.	.	.	.	.																.	.
		705	.	.	.	.	710					.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.
Predicted Secondary structure								.	.	.	.
Query SS confidence								.	.	.	.
Query Sequence		D	I	L	I	G	T	.	.	.	.	H	K	L	L	Q	S	D	V	K	F	K	D	L	G	L	L	I	V	D	E	E	H	R	F	G	V	R	H	K	E	R	I	K	A	M	R	A	N	V	D	I	L	T	L	T	A
Query Conservation								.	.	.	.
Alig confidence								.	.	.	.
Template Conservation
Template Sequence		S	V	E	V	E	S	A	P	E	I	L	N	Y	I	M	S	N	S	F	N	D	E	T	K	V	I	G	I	D	E	V	Q	F	F	D	D	R	I	C	E	V	A	N	I	L	A	E	N	G	F	V	V	I	I	S	G
Template Known Secondary structure						S	S	T									S	T	T	S		T	T								S	G	G	G	S		T												T	T
Template Predicted Secondary structure
Template SS confidence
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions