Return to main results Retrieve Phyre Job Id

Job DescriptionP30958
Confidence98.27%DateThu Jan 5 11:46:49 GMT 2012
Rank153Aligned Residues86
% Identity12%Templatec1pjrA_
PDB info PDB header:helicaseChain: A: PDB Molecule:pcra; PDBTitle: structure of dna helicase
Resolution2.50 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   587..590.........600.........610.........620.........630.........640.........650 .........660..
Predicted Secondary structure 





















....

Query SS confidence 































































. . . .











Query Sequence  REQYQLFCDSFPFETTPDQAQAINAVLSDMCQPLAMDRLVCGDVGFGKTEVAMRAAFLAVDNHK. . . . QVAVLVPTTLLA
Query Conservation        
   
    
 

  

  
  
      




 



 





  

  
   

....

 




  

Alig confidence 








....











......




..

























....











Template Conservation        
  .... 
   
  

  ......     ..

 







  
   
  

         


 
 

 
 
Template Sequence  NFLSEQLLA. . . . HLNKEQQEAVRT. . . . . . TEGPL. . LIMAGAGSGKTRVLTHRIAYLMAEKHVAPWNILAITFTNKAA
Template Known Secondary structure 
T....TS

......
SS
..
TTS
TT


GGGSS
Template Predicted Secondary structure 
....



......



..











Template SS confidence 















































































   2.......10 .........20.. ..... ..30.........40.........50.........60.........
 
   663......670.........680....
Predicted Secondary structure 





Query SS confidence 





















Query Sequence  QQHYDNFRDRFANWPVRIEMIS
Query Conservation   
    
  

    
 
  

Alig confidence 





















Template Conservation 
    

            
 
Template Sequence  REMRERVQSLLGGAAEDVWIST
Template Known Secondary structure  GGGGTTS
Template Predicted Secondary structure 






Template SS confidence 





















   70.........80.........90.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions